Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC007952.6-201ENST00000573168 2673 ntBASIC24.01■■□□□ 1.43
SRGAP3O43295 AC003957.1-201ENST00000625108 2673 ntBASIC24.01■■□□□ 1.43
SRGAP3O43295 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
SRGAP3O43295 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SRGAP3O43295 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SRGAP3O43295 AC093484.2-201ENST00000580996 2166 ntBASIC24.01■■□□□ 1.43
SRGAP3O43295 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SRGAP3O43295 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
SRGAP3O43295 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
SRGAP3O43295 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SRGAP3O43295 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC24■■□□□ 1.43
SRGAP3O43295 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC24■■□□□ 1.43
SRGAP3O43295 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SRGAP3O43295 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC24■■□□□ 1.43
SRGAP3O43295 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC24■■□□□ 1.43
SRGAP3O43295 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC24■■□□□ 1.43
SRGAP3O43295 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
SRGAP3O43295 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC24■■□□□ 1.43
SRGAP3O43295 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24■■□□□ 1.43
SRGAP3O43295 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC24■■□□□ 1.43
SRGAP3O43295 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24■■□□□ 1.43
SRGAP3O43295 AC130371.2-201ENST00000619443 611 ntBASIC24■■□□□ 1.43
SRGAP3O43295 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24■■□□□ 1.43
SRGAP3O43295 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24■■□□□ 1.43
SRGAP3O43295 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
SRGAP3O43295 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC24■■□□□ 1.43
SRGAP3O43295 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SRGAP3O43295 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SRGAP3O43295 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SRGAP3O43295 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
SRGAP3O43295 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24■■□□□ 1.43
SRGAP3O43295 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC24■■□□□ 1.43
SRGAP3O43295 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC24■■□□□ 1.43
SRGAP3O43295 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.99■■□□□ 1.43
SRGAP3O43295 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SRGAP3O43295 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.99■■□□□ 1.43
SRGAP3O43295 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SRGAP3O43295 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SRGAP3O43295 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.99■■□□□ 1.43
SRGAP3O43295 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.99■■□□□ 1.43
SRGAP3O43295 AC091390.4-202ENST00000476426 537 ntBASIC23.99■■□□□ 1.43
SRGAP3O43295 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.99■■□□□ 1.43
SRGAP3O43295 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.99■■□□□ 1.43
SRGAP3O43295 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.99■■□□□ 1.43
SRGAP3O43295 AC011298.2-201ENST00000617989 482 ntBASIC23.99■■□□□ 1.43
SRGAP3O43295 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.99■■□□□ 1.43
SRGAP3O43295 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SRGAP3O43295 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
SRGAP3O43295 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SRGAP3O43295 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SRGAP3O43295 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.99■■□□□ 1.43
SRGAP3O43295 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SRGAP3O43295 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SRGAP3O43295 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SRGAP3O43295 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SRGAP3O43295 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SRGAP3O43295 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SRGAP3O43295 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
SRGAP3O43295 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SRGAP3O43295 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SRGAP3O43295 AC004951.3-201ENST00000418645 1148 ntBASIC23.98■■□□□ 1.43
SRGAP3O43295 RBM17P1-201ENST00000453646 1190 ntBASIC23.98■■□□□ 1.43
SRGAP3O43295 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.98■■□□□ 1.43
SRGAP3O43295 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.98■■□□□ 1.43
SRGAP3O43295 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.98■■□□□ 1.43
SRGAP3O43295 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.98■■□□□ 1.43
SRGAP3O43295 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SRGAP3O43295 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.98■■□□□ 1.43
SRGAP3O43295 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.98■■□□□ 1.43
SRGAP3O43295 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SRGAP3O43295 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SRGAP3O43295 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.98■■□□□ 1.43
SRGAP3O43295 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SRGAP3O43295 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SRGAP3O43295 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SRGAP3O43295 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SRGAP3O43295 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SRGAP3O43295 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.97■■□□□ 1.43
SRGAP3O43295 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SRGAP3O43295 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.97■■□□□ 1.43
SRGAP3O43295 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SRGAP3O43295 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SRGAP3O43295 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
SRGAP3O43295 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.97■■□□□ 1.43
SRGAP3O43295 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SRGAP3O43295 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.96■■□□□ 1.43
SRGAP3O43295 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.96■■□□□ 1.43
SRGAP3O43295 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
SRGAP3O43295 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SRGAP3O43295 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SRGAP3O43295 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.96■■□□□ 1.43
SRGAP3O43295 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.96■■□□□ 1.43
SRGAP3O43295 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
SRGAP3O43295 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SRGAP3O43295 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SRGAP3O43295 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SRGAP3O43295 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SRGAP3O43295 AC079598.2-202ENST00000546624 1451 ntBASIC23.95■■□□□ 1.42
SRGAP3O43295 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
SRGAP3O43295 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms