Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.31■□□□□ 0.52
UPK1AO00322 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.31■□□□□ 0.52
UPK1AO00322 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1AO00322 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1AO00322 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1AO00322 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1AO00322 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.31■□□□□ 0.52
UPK1AO00322 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.31■□□□□ 0.52
UPK1AO00322 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.31■□□□□ 0.52
UPK1AO00322 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.31■□□□□ 0.52
UPK1AO00322 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.31■□□□□ 0.52
UPK1AO00322 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1AO00322 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.31■□□□□ 0.52
UPK1AO00322 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1AO00322 AL121829.2-201ENST00000620908 328 ntBASIC18.31■□□□□ 0.52
UPK1AO00322 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
UPK1AO00322 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
UPK1AO00322 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.31■□□□□ 0.52
UPK1AO00322 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1AO00322 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.31■□□□□ 0.52
UPK1AO00322 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1AO00322 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1AO00322 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.3■□□□□ 0.52
UPK1AO00322 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
UPK1AO00322 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1AO00322 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1AO00322 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.3■□□□□ 0.52
UPK1AO00322 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
UPK1AO00322 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.3■□□□□ 0.52
UPK1AO00322 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1AO00322 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.3■□□□□ 0.52
UPK1AO00322 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.3■□□□□ 0.52
UPK1AO00322 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
UPK1AO00322 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1AO00322 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
UPK1AO00322 POM121L13P-201ENST00000422362 380 ntBASIC18.3■□□□□ 0.52
UPK1AO00322 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.3■□□□□ 0.52
UPK1AO00322 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
UPK1AO00322 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1AO00322 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
UPK1AO00322 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.3■□□□□ 0.52
UPK1AO00322 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.3■□□□□ 0.52
UPK1AO00322 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1AO00322 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1AO00322 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1AO00322 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
UPK1AO00322 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.3■□□□□ 0.52
UPK1AO00322 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1AO00322 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1AO00322 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.3■□□□□ 0.52
UPK1AO00322 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.29■□□□□ 0.52
UPK1AO00322 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
UPK1AO00322 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
UPK1AO00322 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.29■□□□□ 0.52
UPK1AO00322 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.29■□□□□ 0.52
UPK1AO00322 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.29■□□□□ 0.52
UPK1AO00322 AP003097.1-201ENST00000530657 1135 ntBASIC18.29■□□□□ 0.52
UPK1AO00322 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
UPK1AO00322 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.29■□□□□ 0.52
UPK1AO00322 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UPK1AO00322 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
UPK1AO00322 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1AO00322 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.29■□□□□ 0.52
UPK1AO00322 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UPK1AO00322 AP006587.1-201ENST00000534129 1502 ntBASIC18.28■□□□□ 0.52
UPK1AO00322 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
UPK1AO00322 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UPK1AO00322 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UPK1AO00322 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.28■□□□□ 0.52
UPK1AO00322 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
UPK1AO00322 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms