Protein–RNA interactions for Protein: C9J069

C9orf172, Uncharacterized protein C9orf172, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf172C9J069 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf172C9J069 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.11■□□□□ 0.49
C9orf172C9J069 STARP1-201ENST00000397973 869 ntBASIC18.11■□□□□ 0.49
C9orf172C9J069 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.11■□□□□ 0.49
C9orf172C9J069 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.11■□□□□ 0.49
C9orf172C9J069 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf172C9J069 ZNF444P1-201ENST00000559497 298 ntBASIC18.11■□□□□ 0.49
C9orf172C9J069 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.11■□□□□ 0.49
C9orf172C9J069 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.11■□□□□ 0.49
C9orf172C9J069 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
C9orf172C9J069 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.11■□□□□ 0.49
C9orf172C9J069 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf172C9J069 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf172C9J069 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf172C9J069 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf172C9J069 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf172C9J069 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf172C9J069 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
C9orf172C9J069 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
C9orf172C9J069 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
C9orf172C9J069 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.1■□□□□ 0.49
C9orf172C9J069 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.1■□□□□ 0.49
C9orf172C9J069 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.1■□□□□ 0.49
C9orf172C9J069 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf172C9J069 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf172C9J069 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.1■□□□□ 0.49
C9orf172C9J069 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.1■□□□□ 0.49
C9orf172C9J069 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.1■□□□□ 0.49
C9orf172C9J069 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.1■□□□□ 0.49
C9orf172C9J069 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.1■□□□□ 0.49
C9orf172C9J069 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.1■□□□□ 0.49
C9orf172C9J069 MIR4674-201ENST00000582457 87 ntBASIC18.1■□□□□ 0.49
C9orf172C9J069 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
C9orf172C9J069 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf172C9J069 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.1■□□□□ 0.49
C9orf172C9J069 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.1■□□□□ 0.49
C9orf172C9J069 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf172C9J069 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf172C9J069 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf172C9J069 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf172C9J069 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
C9orf172C9J069 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
C9orf172C9J069 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.09■□□□□ 0.49
C9orf172C9J069 AL391422.3-201ENST00000603791 2761 ntBASIC18.09■□□□□ 0.49
C9orf172C9J069 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf172C9J069 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf172C9J069 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
C9orf172C9J069 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
C9orf172C9J069 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf172C9J069 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
C9orf172C9J069 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf172C9J069 AL450487.1-201ENST00000426799 995 ntBASIC18.09■□□□□ 0.49
C9orf172C9J069 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.09■□□□□ 0.49
C9orf172C9J069 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.09■□□□□ 0.49
C9orf172C9J069 CLEC4GP1-201ENST00000596555 870 ntBASIC18.09■□□□□ 0.49
C9orf172C9J069 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.09■□□□□ 0.49
C9orf172C9J069 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.09■□□□□ 0.49
C9orf172C9J069 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf172C9J069 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.09■□□□□ 0.49
C9orf172C9J069 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf172C9J069 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.09■□□□□ 0.49
C9orf172C9J069 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf172C9J069 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf172C9J069 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf172C9J069 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.09■□□□□ 0.49
C9orf172C9J069 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
C9orf172C9J069 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.08■□□□□ 0.49
C9orf172C9J069 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
C9orf172C9J069 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.08■□□□□ 0.49
C9orf172C9J069 LINC01311-201ENST00000565162 1445 ntBASIC18.08■□□□□ 0.49
C9orf172C9J069 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
C9orf172C9J069 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
C9orf172C9J069 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.08■□□□□ 0.49
C9orf172C9J069 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.08■□□□□ 0.49
C9orf172C9J069 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.08■□□□□ 0.48
C9orf172C9J069 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf172C9J069 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf172C9J069 SPDYE15P-201ENST00000424157 909 ntBASIC18.08■□□□□ 0.48
C9orf172C9J069 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.08■□□□□ 0.48
C9orf172C9J069 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.08■□□□□ 0.48
C9orf172C9J069 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf172C9J069 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf172C9J069 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf172C9J069 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.08■□□□□ 0.48
C9orf172C9J069 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
C9orf172C9J069 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf172C9J069 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf172C9J069 AP005212.1-201ENST00000581547 1997 ntBASIC18.08■□□□□ 0.48
C9orf172C9J069 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf172C9J069 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf172C9J069 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf172C9J069 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf172C9J069 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf172C9J069 AL162377.1-201ENST00000618844 1793 ntBASIC18.07■□□□□ 0.48
C9orf172C9J069 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf172C9J069 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf172C9J069 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf172C9J069 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf172C9J069 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf172C9J069 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms