Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 LINC01006-201ENST00000333319 2292 ntBASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 KRT18P38-201ENST00000449496 1282 ntBASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 AC008622.2-201ENST00000617006 1229 ntBASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 HLA-A-209ENST00000638375 975 ntBASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.56■□□□□ 0.56
TRABD2BA6NFA1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 AC246785.2-201ENST00000432512 513 ntBASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.55■□□□□ 0.56
TRABD2BA6NFA1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 AC007952.6-201ENST00000573168 2673 ntBASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 AC003957.1-201ENST00000625108 2673 ntBASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRABD2BA6NFA1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 AC018553.1-201ENST00000616682 1458 ntBASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 AC121338.2-201ENST00000622535 1744 ntBASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms