Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 AL121672.3-201ENST00000608644 468 ntBASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC163A0A0D9SF12 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 AC246785.2-201ENST00000432512 513 ntBASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 TSSC2-201ENST00000450217 709 ntBASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 CR769767.2-201ENST00000622735 460 ntBASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC163A0A0D9SF12 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 NUS1P1-201ENST00000446295 882 ntBASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 BX276092.5-203ENST00000456199 560 ntBASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 AC011498.5-201ENST00000592027 486 ntBASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC163A0A0D9SF12 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 MIR4674-201ENST00000582457 87 ntBASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 AF106564.1-201ENST00000607058 2553 ntBASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC163A0A0D9SF12 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC163A0A0D9SF12 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC163A0A0D9SF12 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC163A0A0D9SF12 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC163A0A0D9SF12 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC163A0A0D9SF12 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms