Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 AC116562.2-201ENST00000507042 360 ntBASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV25A0A0B4J276 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV25A0A0B4J276 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV25A0A0B4J276 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV25A0A0B4J276 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV25A0A0B4J276 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV25A0A0B4J276 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV25A0A0B4J276 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRAV25A0A0B4J276 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV25A0A0B4J276 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV25A0A0B4J276 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV25A0A0B4J276 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV25A0A0B4J276 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV25A0A0B4J276 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 AC004951.3-201ENST00000418645 1148 ntBASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 DGCR10-201ENST00000609839 495 ntBASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 MIR6786-201ENST00000616843 113 ntBASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 TREX1-205ENST00000625293 1783 ntBASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRAV25A0A0B4J276 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms