Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 AK4P3-201ENST00000418260 669 ntBASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 NTF6B-201ENST00000591913 560 ntBASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAV19A0A0A6YYK7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 KRT8P11-201ENST00000409686 1436 ntBASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 AL138966.2-201ENST00000621997 464 ntBASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV19A0A0A6YYK7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 AL512604.3-201ENST00000569583 964 ntBASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 AL157384.1-201ENST00000445995 2473 ntBASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV19A0A0A6YYK7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 WWOX-216ENST00000569818 525 ntBASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAV19A0A0A6YYK7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 ZNF815P-204ENST00000434898 1737 ntBASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 AC104417.2-201ENST00000562989 1793 ntBASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms