Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC008687.6-201ENST00000596318 630 ntBASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC004408.2-201ENST00000623613 2777 ntBASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC098934.4-201ENST00000564127 592 ntBASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TEX21P-204ENST00000641479 1693 ntBASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TUBB8P6-201ENST00000436895 1288 ntBASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 KRT18P16-201ENST00000510337 1294 ntBASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC104417.2-201ENST00000562989 1793 ntBASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms