Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 AC097658.1-201ENST00000475555 843 ntBASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 AC091874.3-201ENST00000512672 1195 ntBASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 AL121906.2-201ENST00000621597 723 ntBASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 AP000974.1-201ENST00000623909 2387 ntBASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
TRAV30A0A087WSZ9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV30A0A087WSZ9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms