Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.71□□□□□ -1.66
BLOC1S4Q9NUP1 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.71□□□□□ -1.66
BLOC1S4Q9NUP1 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
BLOC1S4Q9NUP1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BLOC1S4Q9NUP1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
BLOC1S4Q9NUP1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.71□□□□□ -1.66
BLOC1S4Q9NUP1 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BLOC1S4Q9NUP1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BLOC1S4Q9NUP1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 SNORA37-201ENST00000384504 129 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 MIR649-201ENST00000384843 97 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AL590399.6-201ENST00000446396 307 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AC109327.1-201ENST00000471666 403 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 RPS29P19-201ENST00000479709 171 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AC069528.1-202ENST00000482888 637 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AC091167.1-201ENST00000492017 396 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 BOLA3P3-201ENST00000505182 232 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 HPRT1P1-201ENST00000509498 657 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 RNU6-276P-201ENST00000516114 96 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 RNU4-60P-201ENST00000517239 135 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 OR4R3P-201ENST00000525084 838 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AP001317.1-201ENST00000531194 960 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 LSM6P2-201ENST00000552208 177 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AGGF1P8-201ENST00000562979 1000 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 AL445984.1-201ENST00000637834 659 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 SEPT7P7-201ENST00000420492 1301 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 DCAF13P1-201ENST00000495256 1330 ntBASIC4.7□□□□□ -1.66
BLOC1S4Q9NUP1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC090337.1-201ENST00000579651 2074 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 RNU5E-10P-201ENST00000363506 118 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 RNU6-925P-201ENST00000384629 104 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 MIR1179-201ENST00000408703 91 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 RPL23AP26-201ENST00000412728 464 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 FAR2P2-201ENST00000413041 594 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC004690.1-201ENST00000418216 328 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC009237.2-201ENST00000421358 284 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 RPS6P14-201ENST00000425165 719 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 FAR2P4-202ENST00000425399 584 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 CKS1BP5-201ENST00000434172 273 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC092393.1-201ENST00000439625 742 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC006463.2-201ENST00000473326 348 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 VPS26AP1-201ENST00000483197 979 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC119751.4-201ENST00000507498 357 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC093824.1-201ENST00000508796 343 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC006499.6-201ENST00000511169 607 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 MTCYBP27-201ENST00000555160 670 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 YWHAQP7-201ENST00000603536 658 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms