Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.19□□□□□ -1.74
HPS4Q9NQG7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.19□□□□□ -1.74
HPS4Q9NQG7 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.19□□□□□ -1.74
HPS4Q9NQG7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.19□□□□□ -1.74
HPS4Q9NQG7 PHBP17-201ENST00000528576 541 ntBASIC4.19□□□□□ -1.74
HPS4Q9NQG7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.19□□□□□ -1.74
HPS4Q9NQG7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.19□□□□□ -1.74
HPS4Q9NQG7 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HPS4Q9NQG7 MIR6075-201ENST00000620782 95 ntBASIC4.19□□□□□ -1.74
HPS4Q9NQG7 AC103858.2-201ENST00000621471 543 ntBASIC4.19□□□□□ -1.74
HPS4Q9NQG7 AC097460.3-201ENST00000623099 442 ntBASIC4.19□□□□□ -1.74
HPS4Q9NQG7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HPS4Q9NQG7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HPS4Q9NQG7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HPS4Q9NQG7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HPS4Q9NQG7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 ERCC6-202ENST00000374127 1782 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 RNU2-72P-201ENST00000411175 163 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 RPS12P23-201ENST00000419579 400 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 VN1R42P-201ENST00000424651 344 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AC006946.1-201ENST00000429106 328 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AL358472.1-201ENST00000431295 329 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 YWHAEP5-201ENST00000431545 765 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 RPL37P1-201ENST00000432310 284 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 RPS11P1-201ENST00000451072 473 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 FTH1P9-201ENST00000513251 355 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AC027338.1-201ENST00000514840 825 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 RNA5SP309-201ENST00000516670 106 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 CBX3P5-201ENST00000552017 521 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AC106785.3-201ENST00000564064 847 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AC005255.1-201ENST00000593748 216 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AC112230.1-201ENST00000604342 547 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AC114878.2-201ENST00000604863 1251 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AL121772.2-201ENST00000614331 297 ntBASIC4.18□□□□□ -1.74
HPS4Q9NQG7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HPS4Q9NQG7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 SNORA60-201ENST00000362396 134 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 PTGES3P2-201ENST00000407942 482 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 MIR1303-201ENST00000408625 86 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 RNA5SP44-201ENST00000410446 133 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 RNU4-27P-201ENST00000410889 139 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 UBE2V1P11-201ENST00000411559 285 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 JKAMPP1-201ENST00000413804 919 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 RPL31P45-201ENST00000419532 356 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AC091564.1-201ENST00000464563 479 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AP003049.1-201ENST00000529418 457 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AC063950.1-201ENST00000552036 308 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AC068790.5-201ENST00000602741 355 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AC024220.1-201ENST00000603675 484 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AC006946.3-201ENST00000609791 756 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AC233309.1-201ENST00000619522 751 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 ATE1-AS1-202ENST00000636460 506 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 U6.107-201ENST00000637108 79 ntBASIC4.17□□□□□ -1.74
HPS4Q9NQG7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms