Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AL645568.2-201ENST00000432815 1337 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 RNA5SP508-201ENST00000411327 119 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 OR2AH1P-201ENST00000425717 928 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 RPL5P2-201ENST00000429598 854 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 AC005229.2-201ENST00000456995 399 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 ANXA2P1-201ENST00000505539 926 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 AC008694.2-201ENST00000517591 306 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 AC234778.2-201ENST00000566241 354 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 AC106872.2-201ENST00000494303 480 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 RPL31P61-201ENST00000496160 376 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 RN7SKP82-201ENST00000516786 223 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 RNU6-579P-201ENST00000516879 102 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 OR4G2P-202ENST00000641004 1759 ntBASIC3.2□□□□□ -1.9
CHD8Q9HCK8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.2□□□□□ -1.9
CHD8Q9HCK8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 VTA1P1-201ENST00000414044 866 ntBASIC3.19□□□□□ -1.9
CHD8Q9HCK8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 AC022018.1-201ENST00000430685 241 ntBASIC3.19□□□□□ -1.9
CHD8Q9HCK8 RPL23AP89-201ENST00000439324 255 ntBASIC3.19□□□□□ -1.9
CHD8Q9HCK8 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 RNU6-1053P-201ENST00000515930 101 ntBASIC3.19□□□□□ -1.9
CHD8Q9HCK8 VN1R90P-201ENST00000595717 726 ntBASIC3.19□□□□□ -1.9
CHD8Q9HCK8 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 AC015871.5-202ENST00000623252 701 ntBASIC3.19□□□□□ -1.9
CHD8Q9HCK8 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 HMGN2P7-201ENST00000456186 273 ntBASIC3.19□□□□□ -1.9
CHD8Q9HCK8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 AL121766.1-201ENST00000547436 487 ntBASIC3.19□□□□□ -1.9
CHD8Q9HCK8 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 AC044913.1-201ENST00000557200 430 ntBASIC3.19□□□□□ -1.9
CHD8Q9HCK8 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD8Q9HCK8 HSPD1P11-201ENST00000508643 1702 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 RPS3AP26-201ENST00000398259 784 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 MIR1289-2-201ENST00000408360 111 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 DPPA2P2-201ENST00000418220 897 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 AC010655.1-201ENST00000449336 292 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 AC010468.1-201ENST00000461022 817 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 PSMA2P1-201ENST00000526365 646 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 AC015712.3-201ENST00000559380 164 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 AC027216.1-201ENST00000577726 685 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 Z95327.2-201ENST00000414579 1873 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 SAGE2P-201ENST00000420011 2126 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 DBIP2-201ENST00000419076 262 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 SETP12-201ENST00000514068 805 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms