Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 TRBVB-201ENST00000477100 408 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 AC096754.1-201ENST00000508904 818 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 AC109481.1-201ENST00000509173 282 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 Y_RNA.667-201ENST00000516212 107 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 COX6B1P6-201ENST00000522347 255 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 SAA3P-201ENST00000533267 365 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 AC004832.4-201ENST00000608952 331 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 AC130448.2-201ENST00000624082 374 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 U6.114-201ENST00000636407 96 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 NCOA4P3-201ENST00000513203 1877 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 AC007342.5-201ENST00000571340 2142 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 AC096921.2-201ENST00000561507 1916 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 RNY1-201ENST00000364228 113 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 EIF5P1-201ENST00000400019 1231 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 AL590290.1-201ENST00000405336 380 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 OR3A2-201ENST00000408891 1076 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 RN7SKP235-201ENST00000410662 305 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 RPS17P17-201ENST00000419392 409 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 AL035551.1-201ENST00000446931 348 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 RNU7-27P-201ENST00000459281 62 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 AC093267.1-201ENST00000489176 961 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 AC011979.2-201ENST00000527568 352 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 AL049839.1-201ENST00000556151 657 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 AC092121.1-201ENST00000569452 202 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 MIR3691-201ENST00000578066 90 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 MIR5188-201ENST00000583467 113 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 AC011494.1-201ENST00000596454 237 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 AC020910.3-201ENST00000603701 874 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 AP001486.3-201ENST00000615334 372 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 AL357559.1-201ENST00000622228 274 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 MIR4272-201ENST00000635924 64 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.12□□□□□ -1.27
LRCH3Q96II8 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.12□□□□□ -1.27
LRCH3Q96II8 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LRCH3Q96II8 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LRCH3Q96II8 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LRCH3Q96II8 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
LRCH3Q96II8 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LRCH3Q96II8 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LRCH3Q96II8 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LRCH3Q96II8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms