Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.14□□□□□ -1.91
UBA52P62987 RPS4XP2-201ENST00000458402 793 ntBASIC3.14□□□□□ -1.91
UBA52P62987 AC084198.1-201ENST00000477747 402 ntBASIC3.14□□□□□ -1.91
UBA52P62987 RPL23AP73-201ENST00000492507 471 ntBASIC3.14□□□□□ -1.91
UBA52P62987 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
UBA52P62987 CDH12P2-201ENST00000504393 298 ntBASIC3.14□□□□□ -1.91
UBA52P62987 RN7SKP34-201ENST00000516142 244 ntBASIC3.14□□□□□ -1.91
UBA52P62987 SOD1P3-201ENST00000518682 454 ntBASIC3.14□□□□□ -1.91
UBA52P62987 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.14□□□□□ -1.91
UBA52P62987 YPEL5P3-201ENST00000547227 352 ntBASIC3.14□□□□□ -1.91
UBA52P62987 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.14□□□□□ -1.91
UBA52P62987 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.14□□□□□ -1.91
UBA52P62987 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
UBA52P62987 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.14□□□□□ -1.91
UBA52P62987 AC115621.1-201ENST00000604653 858 ntBASIC3.14□□□□□ -1.91
UBA52P62987 AL137849.1-201ENST00000604767 169 ntBASIC3.14□□□□□ -1.91
UBA52P62987 AC012531.5-201ENST00000611375 151 ntBASIC3.14□□□□□ -1.91
UBA52P62987 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
UBA52P62987 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
UBA52P62987 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.14□□□□□ -1.91
UBA52P62987 BX005019.1-201ENST00000561881 1810 ntBASIC3.14□□□□□ -1.91
UBA52P62987 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBA52P62987 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
UBA52P62987 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBA52P62987 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBA52P62987 RNA5SP399-201ENST00000364003 117 ntBASIC3.13□□□□□ -1.91
UBA52P62987 RNA5SP72-201ENST00000364442 117 ntBASIC3.13□□□□□ -1.91
UBA52P62987 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBA52P62987 MIR491-201ENST00000384877 84 ntBASIC3.13□□□□□ -1.91
UBA52P62987 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.13□□□□□ -1.91
UBA52P62987 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.13□□□□□ -1.91
UBA52P62987 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.13□□□□□ -1.91
UBA52P62987 AL591419.1-201ENST00000427423 339 ntBASIC3.13□□□□□ -1.91
UBA52P62987 HIGD1AP12-201ENST00000427832 281 ntBASIC3.13□□□□□ -1.91
UBA52P62987 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBA52P62987 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.13□□□□□ -1.91
UBA52P62987 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.13□□□□□ -1.91
UBA52P62987 AC104978.1-201ENST00000449387 391 ntBASIC3.13□□□□□ -1.91
UBA52P62987 RPL7P31-201ENST00000450192 724 ntBASIC3.13□□□□□ -1.91
UBA52P62987 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.13□□□□□ -1.91
UBA52P62987 FCF1P3-201ENST00000496394 590 ntBASIC3.13□□□□□ -1.91
UBA52P62987 UBE2CP3-201ENST00000502715 450 ntBASIC3.13□□□□□ -1.91
UBA52P62987 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.13□□□□□ -1.91
UBA52P62987 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.13□□□□□ -1.91
UBA52P62987 SNORA70.24-201ENST00000517233 118 ntBASIC3.13□□□□□ -1.91
UBA52P62987 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.13□□□□□ -1.91
UBA52P62987 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.13□□□□□ -1.91
UBA52P62987 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.13□□□□□ -1.91
UBA52P62987 TRAV37-201ENST00000553906 342 ntBASIC3.13□□□□□ -1.91
UBA52P62987 GTF2IP22-201ENST00000554443 182 ntBASIC3.13□□□□□ -1.91
UBA52P62987 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.13□□□□□ -1.91
UBA52P62987 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.13□□□□□ -1.91
UBA52P62987 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.13□□□□□ -1.91
UBA52P62987 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.13□□□□□ -1.91
UBA52P62987 U3.45-201ENST00000607547 219 ntBASIC3.13□□□□□ -1.91
UBA52P62987 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.13□□□□□ -1.91
UBA52P62987 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.13□□□□□ -1.91
UBA52P62987 C2orf27A-204ENST00000623058 969 ntBASIC3.13□□□□□ -1.91
UBA52P62987 AC007342.8-201ENST00000623278 678 ntBASIC3.13□□□□□ -1.91
UBA52P62987 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBA52P62987 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBA52P62987 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBA52P62987 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
UBA52P62987 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
UBA52P62987 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBA52P62987 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
UBA52P62987 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBA52P62987 RNA5SP235-201ENST00000365411 114 ntBASIC3.12□□□□□ -1.91
UBA52P62987 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBA52P62987 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.12□□□□□ -1.91
UBA52P62987 RPL5P19-201ENST00000404228 893 ntBASIC3.12□□□□□ -1.91
UBA52P62987 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.12□□□□□ -1.91
UBA52P62987 SYF2P2-201ENST00000417620 583 ntBASIC3.12□□□□□ -1.91
UBA52P62987 AL035423.1-201ENST00000420331 213 ntBASIC3.12□□□□□ -1.91
UBA52P62987 OR4F13P-201ENST00000428478 931 ntBASIC3.12□□□□□ -1.91
UBA52P62987 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.12□□□□□ -1.91
UBA52P62987 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBA52P62987 RANP8-201ENST00000444720 713 ntBASIC3.12□□□□□ -1.91
UBA52P62987 PRDX3P3-201ENST00000447765 522 ntBASIC3.12□□□□□ -1.91
UBA52P62987 AL133162.1-201ENST00000463228 453 ntBASIC3.12□□□□□ -1.91
UBA52P62987 TRAV31-201ENST00000502780 342 ntBASIC3.12□□□□□ -1.91
UBA52P62987 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBA52P62987 SNORA74D-201ENST00000516404 141 ntBASIC3.12□□□□□ -1.91
UBA52P62987 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.12□□□□□ -1.91
UBA52P62987 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.12□□□□□ -1.91
UBA52P62987 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.12□□□□□ -1.91
UBA52P62987 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.12□□□□□ -1.91
UBA52P62987 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.12□□□□□ -1.91
UBA52P62987 AC004024.1-201ENST00000549244 247 ntBASIC3.12□□□□□ -1.91
UBA52P62987 NPM1P47-201ENST00000560843 856 ntBASIC3.12□□□□□ -1.91
UBA52P62987 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.12□□□□□ -1.91
UBA52P62987 SNX6P1-201ENST00000601728 1224 ntBASIC3.12□□□□□ -1.91
UBA52P62987 AL160281.1-201ENST00000605307 311 ntBASIC3.12□□□□□ -1.91
UBA52P62987 AC092354.2-201ENST00000607786 514 ntBASIC3.12□□□□□ -1.91
UBA52P62987 AL159169.2-201ENST00000610061 1269 ntBASIC3.12□□□□□ -1.91
UBA52P62987 AC073530.2-201ENST00000623987 261 ntBASIC3.12□□□□□ -1.91
UBA52P62987 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBA52P62987 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
UBA52P62987 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
UBA52P62987 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms