Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.15□□□□□ -1.91
AP3S2P59780 TRAV15-201ENST00000556680 249 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.15□□□□□ -1.91
AP3S2P59780 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.15□□□□□ -1.91
AP3S2P59780 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.15□□□□□ -1.91
AP3S2P59780 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.15□□□□□ -1.91
AP3S2P59780 AC112230.1-201ENST00000604342 547 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 AL451074.6-201ENST00000608512 729 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 AP005212.4-201ENST00000614206 710 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
AP3S2P59780 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
AP3S2P59780 AC116096.1-201ENST00000566804 2314 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
AP3S2P59780 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
AP3S2P59780 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
AP3S2P59780 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.15□□□□□ -1.91
AP3S2P59780 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
AP3S2P59780 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.14□□□□□ -1.91
AP3S2P59780 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
AP3S2P59780 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
AP3S2P59780 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
AP3S2P59780 MIR30E-201ENST00000362104 92 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 RN7SKP15-201ENST00000364742 309 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S2P59780 RNA5SP293-201ENST00000410527 113 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S2P59780 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC074367.1-201ENST00000438685 1125 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.14□□□□□ -1.91
AP3S2P59780 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.14□□□□□ -1.91
AP3S2P59780 RPL5P24-201ENST00000463742 885 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.14□□□□□ -1.91
AP3S2P59780 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S2P59780 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.14□□□□□ -1.91
AP3S2P59780 NDUFB5P1-201ENST00000508134 564 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC138701.1-201ENST00000524329 714 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.14□□□□□ -1.91
AP3S2P59780 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC010615.3-201ENST00000597319 394 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.14□□□□□ -1.91
AP3S2P59780 MIR6780A-201ENST00000615089 68 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 FAM157B-203ENST00000639350 358 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
AP3S2P59780 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.14□□□□□ -1.91
AP3S2P59780 AC068647.1-201ENST00000489539 2265 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
AP3S2P59780 AC131971.1-201ENST00000332881 1482 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 AC110774.1-201ENST00000623567 2018 ntBASIC3.14□□□□□ -1.91
AP3S2P59780 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP3S2P59780 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
AP3S2P59780 AL049737.1-201ENST00000413920 1403 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 SRP72P2-201ENST00000344851 1979 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.13□□□□□ -1.91
AP3S2P59780 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP3S2P59780 RNU6-335P-201ENST00000364563 113 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 ENSAP1-201ENST00000392855 326 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 ST13P16-201ENST00000401760 781 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 GSTA12P-201ENST00000402398 508 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 ZNF602P-201ENST00000405929 924 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AC068533.1-201ENST00000418542 415 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AL513174.1-201ENST00000423182 629 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 GLRXP1-201ENST00000423261 334 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.13□□□□□ -1.91
AP3S2P59780 B3GNT2P1-201ENST00000434960 952 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AL627308.1-201ENST00000435693 821 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
AP3S2P59780 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.13□□□□□ -1.91
AP3S2P59780 SETD6P1-201ENST00000444575 317 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.13□□□□□ -1.91
AP3S2P59780 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.13□□□□□ -1.91
AP3S2P59780 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.13□□□□□ -1.91
AP3S2P59780 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 RPL23AP67-201ENST00000465341 474 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AC010618.1-201ENST00000469924 477 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 RPS27AP13-201ENST00000498403 237 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 KCTD9P5-201ENST00000504141 1170 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 OR5M14P-201ENST00000506803 618 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AC108475.1-201ENST00000507880 950 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 RNU6-579P-201ENST00000516879 102 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.13□□□□□ -1.91
AP3S2P59780 AF279873.1-201ENST00000523393 313 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
AP3S2P59780 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.13□□□□□ -1.91
AP3S2P59780 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.13□□□□□ -1.91
AP3S2P59780 PSMB7P1-201ENST00000556349 514 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AC005951.1-201ENST00000576706 485 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.13□□□□□ -1.91
AP3S2P59780 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.13□□□□□ -1.91
AP3S2P59780 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.13□□□□□ -1.91
AP3S2P59780 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms