Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIM2P55344 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LIM2P55344 AC027287.1-201ENST00000553115 1453 ntBASIC3.66□□□□□ -1.82
LIM2P55344 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIM2P55344 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
LIM2P55344 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIM2P55344 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LIM2P55344 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
LIM2P55344 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
LIM2P55344 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LIM2P55344 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.65□□□□□ -1.83
LIM2P55344 RNA5SP479-201ENST00000364858 117 ntBASIC3.65□□□□□ -1.83
LIM2P55344 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.65□□□□□ -1.83
LIM2P55344 RN7SKP56-201ENST00000410513 331 ntBASIC3.65□□□□□ -1.83
LIM2P55344 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.65□□□□□ -1.83
LIM2P55344 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.65□□□□□ -1.83
LIM2P55344 AL138785.1-201ENST00000425821 331 ntBASIC3.65□□□□□ -1.83
LIM2P55344 IFNNP1-201ENST00000429219 553 ntBASIC3.65□□□□□ -1.83
LIM2P55344 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.65□□□□□ -1.83
LIM2P55344 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIM2P55344 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.65□□□□□ -1.83
LIM2P55344 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.65□□□□□ -1.83
LIM2P55344 Z74696.2-201ENST00000436514 498 ntBASIC3.65□□□□□ -1.83
LIM2P55344 AL158053.1-201ENST00000441503 453 ntBASIC3.65□□□□□ -1.83
LIM2P55344 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.65□□□□□ -1.83
LIM2P55344 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.65□□□□□ -1.83
LIM2P55344 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIM2P55344 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.65□□□□□ -1.83
LIM2P55344 HMGB3P13-201ENST00000511263 607 ntBASIC3.65□□□□□ -1.83
LIM2P55344 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.65□□□□□ -1.83
LIM2P55344 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.65□□□□□ -1.83
LIM2P55344 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
LIM2P55344 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.65□□□□□ -1.83
LIM2P55344 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.65□□□□□ -1.83
LIM2P55344 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIM2P55344 AC095057.3-201ENST00000567102 1157 ntBASIC3.65□□□□□ -1.83
LIM2P55344 AC022916.3-201ENST00000592961 742 ntBASIC3.65□□□□□ -1.83
LIM2P55344 PCNAP1-202ENST00000595299 752 ntBASIC3.65□□□□□ -1.83
LIM2P55344 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIM2P55344 VN1R85P-201ENST00000601587 426 ntBASIC3.65□□□□□ -1.83
LIM2P55344 AL008729.2-201ENST00000606393 473 ntBASIC3.65□□□□□ -1.83
LIM2P55344 AC017076.1-201ENST00000607613 578 ntBASIC3.65□□□□□ -1.83
LIM2P55344 AC096586.1-201ENST00000610267 561 ntBASIC3.65□□□□□ -1.83
LIM2P55344 AC024941.1-201ENST00000612250 334 ntBASIC3.65□□□□□ -1.83
LIM2P55344 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIM2P55344 AC243756.2-201ENST00000618406 463 ntBASIC3.65□□□□□ -1.83
LIM2P55344 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.65□□□□□ -1.83
LIM2P55344 AC080188.3-201ENST00000624842 748 ntBASIC3.65□□□□□ -1.83
LIM2P55344 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.65□□□□□ -1.83
LIM2P55344 BMS1P21-201ENST00000634565 365 ntBASIC3.65□□□□□ -1.83
LIM2P55344 ATE1-AS1-202ENST00000636460 506 ntBASIC3.65□□□□□ -1.83
LIM2P55344 AF001550.2-201ENST00000636643 217 ntBASIC3.65□□□□□ -1.83
LIM2P55344 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.65□□□□□ -1.83
LIM2P55344 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.65□□□□□ -1.83
LIM2P55344 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIM2P55344 AC026951.1-201ENST00000559530 2459 ntBASIC3.65□□□□□ -1.83
LIM2P55344 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIM2P55344 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIM2P55344 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LIM2P55344 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LIM2P55344 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LIM2P55344 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIM2P55344 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LIM2P55344 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIM2P55344 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LIM2P55344 RNU6-1339P-201ENST00000363574 91 ntBASIC3.64□□□□□ -1.83
LIM2P55344 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LIM2P55344 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LIM2P55344 HMGN2P8-201ENST00000391458 268 ntBASIC3.64□□□□□ -1.83
LIM2P55344 MIR1193-201ENST00000408109 78 ntBASIC3.64□□□□□ -1.83
LIM2P55344 AC023347.2-201ENST00000433994 462 ntBASIC3.64□□□□□ -1.83
LIM2P55344 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.64□□□□□ -1.83
LIM2P55344 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.64□□□□□ -1.83
LIM2P55344 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.64□□□□□ -1.83
LIM2P55344 GTF2IP12-201ENST00000456547 356 ntBASIC3.64□□□□□ -1.83
LIM2P55344 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.64□□□□□ -1.83
LIM2P55344 AC104689.1-201ENST00000473356 768 ntBASIC3.64□□□□□ -1.83
LIM2P55344 RN7SL323P-201ENST00000494712 295 ntBASIC3.64□□□□□ -1.83
LIM2P55344 OR5H3P-201ENST00000502817 919 ntBASIC3.64□□□□□ -1.83
LIM2P55344 AC016550.1-201ENST00000505348 785 ntBASIC3.64□□□□□ -1.83
LIM2P55344 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.64□□□□□ -1.83
LIM2P55344 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.64□□□□□ -1.83
LIM2P55344 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.64□□□□□ -1.83
LIM2P55344 RNU6-352P-201ENST00000516908 107 ntBASIC3.64□□□□□ -1.83
LIM2P55344 AC022790.1-201ENST00000522872 204 ntBASIC3.64□□□□□ -1.83
LIM2P55344 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.64□□□□□ -1.83
LIM2P55344 AC084824.1-201ENST00000550917 1005 ntBASIC3.64□□□□□ -1.83
LIM2P55344 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.64□□□□□ -1.83
LIM2P55344 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.64□□□□□ -1.83
LIM2P55344 AC090877.1-201ENST00000561418 344 ntBASIC3.64□□□□□ -1.83
LIM2P55344 AC012254.4-201ENST00000588843 273 ntBASIC3.64□□□□□ -1.83
LIM2P55344 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.64□□□□□ -1.83
LIM2P55344 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.64□□□□□ -1.83
LIM2P55344 AL390816.3-201ENST00000604527 1066 ntBASIC3.64□□□□□ -1.83
LIM2P55344 AC092574.1-201ENST00000609771 420 ntBASIC3.64□□□□□ -1.83
LIM2P55344 AC026368.1-201ENST00000614934 690 ntBASIC3.64□□□□□ -1.83
LIM2P55344 AL354798.1-201ENST00000622505 329 ntBASIC3.64□□□□□ -1.83
LIM2P55344 FP236240.3-201ENST00000623061 327 ntBASIC3.64□□□□□ -1.83
LIM2P55344 NCAPGP1-201ENST00000505112 1814 ntBASIC3.64□□□□□ -1.83
LIM2P55344 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms