Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RNU6-1245P-201ENST00000411130 106 ntBASIC8.55□□□□□ -1.04
HOXD11P31277 RN7SKP30-201ENST00000411373 334 ntBASIC8.55□□□□□ -1.04
HOXD11P31277 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8.55□□□□□ -1.04
HOXD11P31277 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC8.55□□□□□ -1.04
HOXD11P31277 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC8.55□□□□□ -1.04
HOXD11P31277 RNU2-12P-201ENST00000517216 168 ntBASIC8.55□□□□□ -1.04
HOXD11P31277 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC8.55□□□□□ -1.04
HOXD11P31277 UBE2Q2P11-201ENST00000559691 205 ntBASIC8.55□□□□□ -1.04
HOXD11P31277 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC8.55□□□□□ -1.04
HOXD11P31277 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.55□□□□□ -1.04
HOXD11P31277 AL121985.2-201ENST00000621192 555 ntBASIC8.55□□□□□ -1.04
HOXD11P31277 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC8.55□□□□□ -1.04
HOXD11P31277 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 HSPA8P16-201ENST00000454171 1865 ntBASIC8.55□□□□□ -1.04
HOXD11P31277 AC074281.1-201ENST00000436419 2081 ntBASIC8.55□□□□□ -1.04
HOXD11P31277 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC8.55□□□□□ -1.04
HOXD11P31277 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 SCML2-201ENST00000251900 4200 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 PTPN20-201ENST00000374218 2872 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
HOXD11P31277 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
HOXD11P31277 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC8.55□□□□□ -1.04
HOXD11P31277 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXD11P31277 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXD11P31277 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
HOXD11P31277 AC008985.1-201ENST00000624169 2239 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 TLK1P1-201ENST00000456760 2440 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HOXD11P31277 SOX9-AS1-204ENST00000434703 3032 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXD11P31277 AC105233.5-202ENST00000642083 4132 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 MED23-204ENST00000368060 4446 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXD11P31277 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
HOXD11P31277 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXD11P31277 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
HOXD11P31277 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
HOXD11P31277 MFSD8-219ENST00000641228 2559 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC8.54□□□□□ -1.04
HOXD11P31277 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HOXD11P31277 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
HOXD11P31277 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HOXD11P31277 SNORD45.3-201ENST00000363836 72 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 RN7SKP187-201ENST00000365536 330 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
HOXD11P31277 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXD11P31277 PHKG1P1-201ENST00000442924 614 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 PGBD4P5-201ENST00000445958 426 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 AL591473.1-201ENST00000464297 313 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 RN7SL218P-201ENST00000464637 299 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 RN7SL333P-201ENST00000476398 297 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXD11P31277 UBE2Q2P8-201ENST00000560644 102 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC8.54□□□□□ -1.04
HOXD11P31277 POLR3GP1-201ENST00000594073 261 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 BX005214.3-202ENST00000619809 325 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 AC127024.6-201ENST00000621598 424 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 SCARNA4-202ENST00000625402 129 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXD11P31277 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC8.54□□□□□ -1.04
HOXD11P31277 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXD11P31277 COL6A4P1-201ENST00000446690 2336 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXD11P31277 POLR1A-203ENST00000409681 6454 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXD11P31277 TBC1D3P1-DHX40P1-201ENST00000587125 1841 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXD11P31277 AC004801.7-201ENST00000624535 2973 ntBASIC8.54□□□□□ -1.04
HOXD11P31277 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXD11P31277 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXD11P31277 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HOXD11P31277 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXD11P31277 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
HOXD11P31277 PART1-201ENST00000504876 5616 ntTSL 2 BASIC8.53□□□□□ -1.04
HOXD11P31277 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.53□□□□□ -1.04
HOXD11P31277 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
HOXD11P31277 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC8.53□□□□□ -1.04
HOXD11P31277 GALNTL6-203ENST00000506823 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC8.53□□□□□ -1.04
HOXD11P31277 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC8.53□□□□□ -1.04
HOXD11P31277 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC8.53□□□□□ -1.04
HOXD11P31277 SLC8A1-205ENST00000405901 3139 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 AC090643.1-201ENST00000623600 3100 ntBASIC8.53□□□□□ -1.04
HOXD11P31277 AL158071.4-201ENST00000608358 4125 ntBASIC8.53□□□□□ -1.04
HOXD11P31277 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
HOXD11P31277 ZSCAN30-205ENST00000589178 3368 ntTSL 2 BASIC8.53□□□□□ -1.04
HOXD11P31277 PPIAP24-201ENST00000328558 471 ntBASIC8.53□□□□□ -1.04
HOXD11P31277 RNU6-144P-201ENST00000383951 107 ntBASIC8.53□□□□□ -1.04
HOXD11P31277 ENSAP1-201ENST00000392855 326 ntBASIC8.53□□□□□ -1.04
HOXD11P31277 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC8.53□□□□□ -1.04
HOXD11P31277 FTH1P6-201ENST00000430768 320 ntBASIC8.53□□□□□ -1.04
HOXD11P31277 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC8.53□□□□□ -1.04
HOXD11P31277 RNU6-109P-201ENST00000516364 107 ntBASIC8.53□□□□□ -1.04
HOXD11P31277 RNU6-184P-201ENST00000516514 107 ntBASIC8.53□□□□□ -1.04
HOXD11P31277 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC8.53□□□□□ -1.04
HOXD11P31277 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC8.53□□□□□ -1.04
HOXD11P31277 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms