Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 NEAT1-202ENST00000501122 22743 ntBASIC4.68□□□□□ -1.66
EPHA3P29320 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
EPHA3P29320 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
EPHA3P29320 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
EPHA3P29320 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
EPHA3P29320 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
EPHA3P29320 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.68□□□□□ -1.66
EPHA3P29320 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
EPHA3P29320 AC010329.2-201ENST00000595195 2737 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AP000756.2-201ENST00000624168 2567 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EPHA3P29320 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.67□□□□□ -1.66
EPHA3P29320 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
EPHA3P29320 AC092435.4-201ENST00000623012 4159 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC027228.2-201ENST00000567141 2154 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 Z95327.2-201ENST00000414579 1873 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EPHA3P29320 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
EPHA3P29320 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.67□□□□□ -1.66
EPHA3P29320 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EPHA3P29320 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
EPHA3P29320 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EPHA3P29320 OR4A15-201ENST00000314706 1035 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EPHA3P29320 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.67□□□□□ -1.66
EPHA3P29320 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
EPHA3P29320 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
EPHA3P29320 PGBD4P8-201ENST00000412993 562 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHA3P29320 MTCO3P41-201ENST00000414801 328 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AF186996.5-201ENST00000418098 904 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.67□□□□□ -1.66
EPHA3P29320 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.67□□□□□ -1.66
EPHA3P29320 CENPIP1-201ENST00000425713 902 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 NIPA2P1-201ENST00000426223 976 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 RPL36P19-201ENST00000430744 301 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHA3P29320 AL451139.1-201ENST00000434718 346 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHA3P29320 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.67□□□□□ -1.66
EPHA3P29320 MTND1P34-201ENST00000438556 671 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.67□□□□□ -1.66
EPHA3P29320 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.67□□□□□ -1.66
EPHA3P29320 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHA3P29320 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.67□□□□□ -1.66
EPHA3P29320 COX6CP2-201ENST00000444980 225 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.67□□□□□ -1.66
EPHA3P29320 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.67□□□□□ -1.66
EPHA3P29320 HMGN3P1-201ENST00000453847 193 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.67□□□□□ -1.66
EPHA3P29320 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHA3P29320 RN7SL97P-201ENST00000486780 299 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC006499.5-201ENST00000505037 514 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC004069.2-201ENST00000505438 1114 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.67□□□□□ -1.66
EPHA3P29320 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHA3P29320 COX6B1P5-201ENST00000509843 249 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 MTCO2P32-201ENST00000514865 403 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 RNU2-30P-201ENST00000516209 141 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 RNA5SP392-201ENST00000516905 112 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.67□□□□□ -1.66
EPHA3P29320 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.67□□□□□ -1.66
EPHA3P29320 ARL2BPP5-201ENST00000523141 481 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.67□□□□□ -1.66
EPHA3P29320 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.67□□□□□ -1.66
EPHA3P29320 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.67□□□□□ -1.66
EPHA3P29320 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.67□□□□□ -1.66
EPHA3P29320 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.67□□□□□ -1.66
EPHA3P29320 AC137768.1-201ENST00000549998 553 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHA3P29320 FKBP1BP1-201ENST00000553366 325 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 CYCSP2-201ENST00000558168 301 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC093249.4-201ENST00000564755 259 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.67□□□□□ -1.66
EPHA3P29320 AL596327.1-201ENST00000603629 213 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC087283.1-201ENST00000604029 1074 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 COX6CP4-201ENST00000605798 228 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AP000894.4-201ENST00000610185 483 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.67□□□□□ -1.66
EPHA3P29320 AL121890.2-201ENST00000617644 465 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHA3P29320 AC231657.1-201ENST00000624313 397 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.67□□□□□ -1.66
EPHA3P29320 CASC19-264ENST00000641912 1184 ntBASIC4.67□□□□□ -1.66
EPHA3P29320 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EPHA3P29320 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
EPHA3P29320 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHA3P29320 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
EPHA3P29320 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.66□□□□□ -1.66
EPHA3P29320 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
EPHA3P29320 ZNF37BP-203ENST00000452306 1352 ntBASIC4.66□□□□□ -1.66
EPHA3P29320 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EPHA3P29320 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
EPHA3P29320 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
EPHA3P29320 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.66□□□□□ -1.66
EPHA3P29320 SOCS5P3-201ENST00000425115 1576 ntBASIC4.66□□□□□ -1.66
EPHA3P29320 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EPHA3P29320 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
EPHA3P29320 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.66□□□□□ -1.66
EPHA3P29320 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms