Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.01□□□□□ -1.13
CD44P16070 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CD44P16070 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CD44P16070 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CD44P16070 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CD44P16070 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CD44P16070 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC8□□□□□ -1.13
CD44P16070 AC090220.1-201ENST00000593078 1699 ntBASIC8□□□□□ -1.13
CD44P16070 RN7SKP107-201ENST00000364157 290 ntBASIC8□□□□□ -1.13
CD44P16070 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 Y_RNA.542-201ENST00000384641 111 ntBASIC8□□□□□ -1.13
CD44P16070 Y_RNA.569-201ENST00000384749 103 ntBASIC8□□□□□ -1.13
CD44P16070 SNORD73A-201ENST00000386062 65 ntBASIC8□□□□□ -1.13
CD44P16070 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC8□□□□□ -1.13
CD44P16070 RNY4P30-201ENST00000410216 95 ntBASIC8□□□□□ -1.13
CD44P16070 RNA5SP494-201ENST00000410653 129 ntBASIC8□□□□□ -1.13
CD44P16070 Y_RNA.623-201ENST00000411128 95 ntBASIC8□□□□□ -1.13
CD44P16070 RNU6-325P-201ENST00000411132 105 ntBASIC8□□□□□ -1.13
CD44P16070 RPSAP60-201ENST00000415403 880 ntBASIC8□□□□□ -1.13
CD44P16070 GSTA6P-201ENST00000424144 582 ntBASIC8□□□□□ -1.13
CD44P16070 CYP4F32P-201ENST00000426492 504 ntBASIC8□□□□□ -1.13
CD44P16070 AC000362.1-201ENST00000433725 425 ntBASIC8□□□□□ -1.13
CD44P16070 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC8□□□□□ -1.13
CD44P16070 CBX1P4-201ENST00000439415 457 ntBASIC8□□□□□ -1.13
CD44P16070 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC8□□□□□ -1.13
CD44P16070 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8□□□□□ -1.13
CD44P16070 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC8□□□□□ -1.13
CD44P16070 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8□□□□□ -1.13
CD44P16070 RNU7-27P-201ENST00000459281 62 ntBASIC8□□□□□ -1.13
CD44P16070 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 RPS18P6-201ENST00000476880 458 ntBASIC8□□□□□ -1.13
CD44P16070 AC112484.3-201ENST00000505910 329 ntBASIC8□□□□□ -1.13
CD44P16070 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC8□□□□□ -1.13
CD44P16070 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC8□□□□□ -1.13
CD44P16070 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8□□□□□ -1.13
CD44P16070 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC8□□□□□ -1.13
CD44P16070 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC8□□□□□ -1.13
CD44P16070 MIR5692C2-201ENST00000577959 77 ntBASIC8□□□□□ -1.13
CD44P16070 AC015674.1-201ENST00000578482 267 ntBASIC8□□□□□ -1.13
CD44P16070 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC8□□□□□ -1.13
CD44P16070 OR6L2P-201ENST00000608207 925 ntBASIC8□□□□□ -1.13
CD44P16070 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CD44P16070 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8□□□□□ -1.13
CD44P16070 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8□□□□□ -1.13
CD44P16070 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8□□□□□ -1.13
CD44P16070 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CD44P16070 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
CD44P16070 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.99□□□□□ -1.13
CD44P16070 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
CD44P16070 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.99□□□□□ -1.13
CD44P16070 RN7SKP23-201ENST00000625159 4301 ntBASIC7.99□□□□□ -1.13
CD44P16070 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
CD44P16070 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC7.99□□□□□ -1.13
CD44P16070 AL355488.2-201ENST00000609909 2850 ntBASIC7.99□□□□□ -1.13
CD44P16070 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
CD44P16070 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.99□□□□□ -1.13
CD44P16070 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
CD44P16070 RNU6-514P-201ENST00000384208 107 ntBASIC7.99□□□□□ -1.13
CD44P16070 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
CD44P16070 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.99□□□□□ -1.13
CD44P16070 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.99□□□□□ -1.13
CD44P16070 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.99□□□□□ -1.13
CD44P16070 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.99□□□□□ -1.13
CD44P16070 CYCSP43-201ENST00000438233 310 ntBASIC7.99□□□□□ -1.13
CD44P16070 RPL23AP15-201ENST00000450202 459 ntBASIC7.99□□□□□ -1.13
CD44P16070 RPL36AP55-201ENST00000454114 305 ntBASIC7.99□□□□□ -1.13
CD44P16070 RPL37P6-201ENST00000460682 294 ntBASIC7.99□□□□□ -1.13
CD44P16070 RN7SL516P-201ENST00000496127 297 ntBASIC7.99□□□□□ -1.13
CD44P16070 AC106774.2-201ENST00000510266 406 ntBASIC7.99□□□□□ -1.13
CD44P16070 FCF1P8-201ENST00000510322 597 ntBASIC7.99□□□□□ -1.13
CD44P16070 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC7.99□□□□□ -1.13
CD44P16070 RNU6-798P-201ENST00000516912 103 ntBASIC7.99□□□□□ -1.13
CD44P16070 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC7.99□□□□□ -1.13
CD44P16070 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.99□□□□□ -1.13
CD44P16070 ULK4P1-202ENST00000565174 503 ntBASIC7.99□□□□□ -1.13
CD44P16070 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
CD44P16070 AL133393.1-201ENST00000603277 287 ntBASIC7.99□□□□□ -1.13
CD44P16070 AP001554.1-201ENST00000604533 376 ntBASIC7.99□□□□□ -1.13
CD44P16070 AP004247.4-201ENST00000608484 942 ntBASIC7.99□□□□□ -1.13
CD44P16070 AL049539.1-201ENST00000611964 459 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms