Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RNU6-839P-201ENST00000363347 108 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 snoZ40.1-201ENST00000364540 72 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 MIR217-201ENST00000384817 110 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RNA5SP332-201ENST00000391063 115 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 PGBD4P8-201ENST00000412993 562 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC004022.2-201ENST00000413824 193 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 SAGE2P-201ENST00000420011 2126 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 Z93242.1-201ENST00000427102 353 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 CNOT7P1-201ENST00000429006 852 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 MTCO1P3-201ENST00000429327 192 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 USP9YP9-201ENST00000429406 715 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC011742.1-201ENST00000431448 434 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 EEF1A1P39-201ENST00000440791 250 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 PHBP16-201ENST00000446318 950 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RPL7P59-201ENST00000447700 943 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC073264.2-201ENST00000448886 166 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RN7SL98P-201ENST00000462271 300 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RPS6P4-201ENST00000494693 758 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC008638.1-201ENST00000506035 866 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC113347.3-201ENST00000509113 148 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC048346.1-201ENST00000510247 144 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RNA5SP519-201ENST00000516480 119 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 TRAV8-5-201ENST00000537369 341 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 SERPINE4P-201ENST00000554978 281 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC079171.1-201ENST00000568788 914 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RN7SL753P-201ENST00000581238 290 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 MIR4480-201ENST00000582492 71 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 MIR4512-201ENST00000583257 77 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AL390816.3-201ENST00000604527 1066 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC016877.3-201ENST00000606778 504 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC063944.3-201ENST00000609969 533 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AP000894.4-201ENST00000610185 483 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC124312.6-202ENST00000623624 418 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AL773545.4-201ENST00000637262 310 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AL513478.4-201ENST00000641636 310 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 ZNF663P-202ENST00000641770 1131 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 EIF2AP4-201ENST00000424793 1781 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AP005901.5-201ENST00000545779 1796 ntBASIC3.81□□□□□ -1.8
TRBV4-1A0A0J9YWV2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 HMGB1P5-201ENST00000255320 642 ntBASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC016716.1-201ENST00000265882 708 ntBASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RNU1-14P-201ENST00000362759 152 ntBASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RNA5SP391-201ENST00000363456 119 ntBASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RPL23AP1-201ENST00000428990 471 ntBASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 MOB1AP1-201ENST00000430903 535 ntBASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 HMGB1P16-201ENST00000447155 540 ntBASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC079776.3-201ENST00000450665 370 ntBASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 HMGB3P21-201ENST00000452483 547 ntBASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RPS15AP1-201ENST00000457423 391 ntBASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC109327.1-201ENST00000471666 403 ntBASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.8□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms