Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 AC093156.1-201ENST00000440382 670 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 RPS4XP2-201ENST00000458402 793 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 AL139395.1-201ENST00000603662 160 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 AC027287.1-201ENST00000553115 1453 ntBASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 UBTFL9-201ENST00000534504 1148 ntBASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 AL591424.2-201ENST00000617023 128 ntBASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 MIR1287-201ENST00000408492 90 ntBASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 OR5AW1P-201ENST00000426334 1006 ntBASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 AC068724.1-201ENST00000487100 792 ntBASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 TRBV12-2-201ENST00000489763 344 ntBASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 AC017037.2-201ENST00000513850 890 ntBASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 AL590808.1-201ENST00000618696 141 ntBASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.78□□□□□ -1.96
CSMD1Q96PZ7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC2.78□□□□□ -1.97
CSMD1Q96PZ7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 U3.23-201ENST00000391132 200 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 SEPT7P2-202ENST00000398921 823 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AL353678.1-201ENST00000422735 741 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AL513174.1-201ENST00000423182 629 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AC245517.4-201ENST00000448601 281 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AC112198.1-201ENST00000505369 1220 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 ANXA2P1-201ENST00000505539 926 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AC098826.3-201ENST00000603823 466 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 Z83843.1-201ENST00000604070 3685 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 U3.39-201ENST00000408569 239 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AC026782.2-201ENST00000510845 636 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 KCTD9P6-201ENST00000522306 950 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AC005242.1-201ENST00000585658 438 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AP004607.9-201ENST00000618202 316 ntBASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD1Q96PZ7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 RNA5SP42-201ENST00000364278 115 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AC007899.1-201ENST00000412776 775 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AC023598.1-201ENST00000472521 361 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AC006946.3-201ENST00000609791 756 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AL078595.2-201ENST00000605309 1780 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 BX119904.1-201ENST00000432026 348 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 HMGB3P13-201ENST00000511263 607 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 HIGD1AP1-201ENST00000550979 275 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AL034351.1-201ENST00000605288 668 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms