Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC006390.1-201ENST00000508068 283 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AC013828.2-201ENST00000532487 235 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 OR4H6P-201ENST00000563771 921 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AC020634.1-201ENST00000608701 549 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AC096861.1-201ENST00000616652 240 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AC091953.5-201ENST00000622919 233 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 MAPK10-261ENST00000641050 3109 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 SEC63P2-201ENST00000503863 1939 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 MTND5P19-201ENST00000424872 1794 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 Y_RNA.5-201ENST00000362334 102 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 U3.7-201ENST00000363668 216 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 Y_RNA.364-201ENST00000365532 101 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AL445529.1-201ENST00000398713 389 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 RN7SKP59-201ENST00000410520 314 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 CHEK2P3-201ENST00000416118 248 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 PIGPP3-201ENST00000425307 415 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AL445466.1-201ENST00000448432 357 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 GEMIN2P1-201ENST00000454246 752 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 RPS20P21-201ENST00000466859 343 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 RPL22P13-201ENST00000493291 347 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AC108693.1-201ENST00000496068 432 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 TTC39CP1-201ENST00000512513 755 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 Y_RNA.680-201ENST00000516441 93 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AC022861.1-201ENST00000522981 663 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 FO393422.1-201ENST00000603908 708 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AC018889.1-201ENST00000605372 397 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AC007485.1-201ENST00000616755 206 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AC024651.2-201ENST00000562480 2098 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AL049634.1-201ENST00000453770 1720 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 HSPD1P8-201ENST00000400121 1658 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM47Q96LD4 AL731532.1-201ENST00000623972 4236 ntBASIC7.03□□□□□ -1.28
TRIM47Q96LD4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.02□□□□□ -1.28
TRIM47Q96LD4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AL161901.1-201ENST00000624954 3425 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 RNU6-770P-201ENST00000363929 105 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 SNORD113-1-201ENST00000365321 69 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 Y_RNA.455-201ENST00000384230 98 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 Y_RNA.515-201ENST00000384535 112 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AL360271.1-201ENST00000395679 510 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AL136116.1-201ENST00000403591 381 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 TPMTP2-201ENST00000414372 726 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 RPL35AP3-201ENST00000414680 288 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AC234782.4-201ENST00000417646 1048 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 RPL31P12-201ENST00000422587 358 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 BLOC1S2P1-201ENST00000428431 301 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms