Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RPL7L1P10-201ENST00000427790 463 ntBASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AL356010.1-201ENST00000456364 102 ntBASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 ACA64.1-201ENST00000459171 127 ntBASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AC126389.1-201ENST00000477436 290 ntBASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 RNA5SP438-201ENST00000516561 112 ntBASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 RNA5SP434-201ENST00000516647 121 ntBASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AP001922.4-201ENST00000526967 290 ntBASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AP001858.2-201ENST00000536213 601 ntBASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 PISRT1.1-201ENST00000616930 107 ntBASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AC073488.3-201ENST00000631611 778 ntBASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 AC010624.4-201ENST00000597606 1351 ntBASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
NPAS3Q8IXF0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 PABPC1P8-201ENST00000452851 2086 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 RNU1-49P-201ENST00000363468 159 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 RNY1P12-201ENST00000364251 105 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 Y_RNA.274-201ENST00000364714 101 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 RNU6-338P-201ENST00000383888 105 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 Y_RNA.424-201ENST00000384063 103 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 RPL21P1-201ENST00000399532 476 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 SNORA11C-201ENST00000408532 129 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 UBE2V1P14-201ENST00000415815 558 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 AL713922.1-201ENST00000416477 747 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 AC108032.1-201ENST00000416706 207 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 AC079355.1-201ENST00000421770 223 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 PSMA6P3-201ENST00000428242 164 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 PPIAP10-201ENST00000438675 458 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 GMFBP1-201ENST00000467831 427 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 AC114781.3-201ENST00000512083 142 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 AC090572.1-201ENST00000519251 160 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 AP000763.2-201ENST00000540641 163 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 MRPS21P9-201ENST00000571150 257 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 AC068020.1-201ENST00000594215 661 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 AL513218.1-201ENST00000606527 391 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 MIR6768-201ENST00000610734 72 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 SDR42E1P1-201ENST00000611327 477 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 TPTE2P4-201ENST00000258589 1605 ntBASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
NPAS3Q8IXF0 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AC003985.2-201ENST00000562268 1669 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 RNU6-582P-201ENST00000362989 107 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms