Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 EXOSC3P1-201ENST00000448649 500 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC012671.1-201ENST00000451912 203 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC079203.1-201ENST00000487972 404 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC104164.2-201ENST00000496953 495 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC093720.1-201ENST00000505681 714 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC111000.3-201ENST00000508057 576 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 KRT19P6-201ENST00000510983 209 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC016065.2-201ENST00000514530 444 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 MTND1P8-201ENST00000571424 950 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 MIR4666A-201ENST00000580160 79 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 BPIFA4P-203ENST00000603168 689 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC008782.1-201ENST00000603386 430 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AL356121.2-201ENST00000624715 780 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AL157700.1-201ENST00000561973 1432 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 CPHL1P-201ENST00000461341 3407 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 LINC00622-201ENST00000562811 1570 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 MIR129-1-201ENST00000384972 72 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 SNORD96B-201ENST00000386148 79 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 RNA5SP332-201ENST00000391063 115 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC008280.1-201ENST00000418851 412 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 CENPIP1-201ENST00000425713 902 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC114973.1-201ENST00000429057 632 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC068287.1-201ENST00000430283 295 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 RPL23AP25-201ENST00000430973 463 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 YWHAZP8-201ENST00000436935 731 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 HMGN3P1-201ENST00000453847 193 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 snoU13.1-201ENST00000459157 104 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC010307.1-201ENST00000467206 836 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC134698.5-201ENST00000519444 336 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 HIGD1AP6-201ENST00000521833 279 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 OR7E13P-201ENST00000526052 910 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 MTCO3P15-201ENST00000526563 574 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 OR4C2P-201ENST00000530855 1064 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC004217.3-201ENST00000551552 878 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 SLC25A36P1-201ENST00000590111 465 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 YWHAQP7-201ENST00000603536 658 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 RPP40P2-201ENST00000603596 712 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC091979.2-201ENST00000607514 214 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 PART1_2.1-201ENST00000612397 250 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AL050303.3-201ENST00000613704 284 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AC123767.1-202ENST00000620407 817 ntBASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP54Q7Z3B4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms