Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC080014.1-201ENST00000496877 1201 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 HMGB3P13-201ENST00000511263 607 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC015795.1-201ENST00000513669 327 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC009643.1-201ENST00000532030 391 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 CYCSP28-201ENST00000534284 321 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 SLC25A36P1-201ENST00000590111 465 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 VN1R90P-201ENST00000595717 726 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC006539.2-201ENST00000601729 572 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AL451074.6-201ENST00000608512 729 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC122133.1-201ENST00000613964 233 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 RNF6P1-201ENST00000444889 1784 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 RNA5SP447-201ENST00000363749 119 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 Y_RNA.201-201ENST00000364052 96 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 SNORD65.1-201ENST00000390889 71 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 MIR921-201ENST00000401133 56 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AL009174.1-201ENST00000426577 416 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 DLGAP5P1-201ENST00000430307 464 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AC010153.1-201ENST00000432862 727 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 USP9YP28-201ENST00000435142 589 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 MTCYBP34-201ENST00000439552 670 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 MTCYBP3-201ENST00000445588 1137 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AL591623.2-201ENST00000449978 222 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AP000942.1-201ENST00000463969 747 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 GAPDHP36-201ENST00000480688 918 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AC084824.1-201ENST00000550917 1005 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AL390334.1-201ENST00000556395 450 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AC002400.1-201ENST00000569310 726 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 MIR3915-201ENST00000578518 97 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 MIR4999-201ENST00000585029 91 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AP001981.2-201ENST00000603241 418 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AC131235.4-201ENST00000609288 620 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 MIR378J-201ENST00000611988 109 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AC121761.2-201ENST00000617300 689 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AF246928.1-201ENST00000623768 87 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AP003497.2-201ENST00000624220 967 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 AC116618.1-201ENST00000634617 774 ntBASIC4.82□□□□□ -1.64
VSTM1Q6UX27 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VSTM1Q6UX27 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
VSTM1Q6UX27 AC139713.2-214ENST00000642059 1811 ntBASIC4.81□□□□□ -1.64
VSTM1Q6UX27 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.81□□□□□ -1.64
VSTM1Q6UX27 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
VSTM1Q6UX27 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VSTM1Q6UX27 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.81□□□□□ -1.64
VSTM1Q6UX27 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VSTM1Q6UX27 RNU6-1200P-201ENST00000384162 107 ntBASIC4.81□□□□□ -1.64
VSTM1Q6UX27 CEACAMP8-201ENST00000413902 580 ntBASIC4.81□□□□□ -1.64
VSTM1Q6UX27 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.81□□□□□ -1.64
VSTM1Q6UX27 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.81□□□□□ -1.64
VSTM1Q6UX27 RPL7P44-201ENST00000424827 742 ntBASIC4.81□□□□□ -1.64
VSTM1Q6UX27 NIPA2P1-201ENST00000426223 976 ntBASIC4.81□□□□□ -1.64
VSTM1Q6UX27 AC016712.1-201ENST00000431088 378 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms