Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC087821.2-201ENST00000637086 450 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AC107068.1-201ENST00000563286 4218 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 HMGB1P5-201ENST00000255320 642 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 ZNF603P-201ENST00000405613 487 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 RAP1BP1-201ENST00000412709 553 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 MTND4P22-201ENST00000413116 1169 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 RPP40P1-201ENST00000426762 456 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 PSMA2P3-201ENST00000429685 675 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 OR1H1P-201ENST00000448731 937 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 RSL24D1P3-201ENST00000449255 495 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 AC104978.1-201ENST00000449387 391 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 CEACAMP6-201ENST00000452007 574 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 HMGN3P1-201ENST00000453847 193 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 FABP5P12-201ENST00000515543 389 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 AP006289.1-201ENST00000538089 277 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 AC092747.2-201ENST00000545069 983 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 AADACP1-206ENST00000561502 1193 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 AP003973.1-201ENST00000604639 691 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 AL354760.1-201ENST00000608357 643 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 AC009090.3-201ENST00000616553 565 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 MIR6810-201ENST00000622701 70 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 AC011978.2-201ENST00000569835 2054 ntBASIC5.38□□□□□ -1.55
LONRF3Q496Y0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LONRF3Q496Y0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 snoZ40.1-201ENST00000364540 72 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 RNU6-619P-201ENST00000365146 108 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 SNORD116-1-201ENST00000384335 95 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 MIR192-201ENST00000384915 110 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AL080315.1-201ENST00000406055 466 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 MIR1302-8-201ENST00000408342 128 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 RNA5SP113-201ENST00000410486 84 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC073143.1-201ENST00000436316 395 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC011753.3-201ENST00000443436 406 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC073264.2-201ENST00000448886 166 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC087879.1-201ENST00000474343 374 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AP000926.1-201ENST00000479573 241 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC093755.1-201ENST00000512950 1023 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 RN7SKP277-201ENST00000516895 283 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 MTCYBP28-201ENST00000566728 1132 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 RN7SL802P-201ENST00000577858 299 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 MIR5699-201ENST00000578903 90 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC091042.1-201ENST00000579213 173 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 MRPS35P3-201ENST00000603189 709 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AL450489.1-201ENST00000612071 468 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC007490.1-201ENST00000624321 703 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AC010928.1-201ENST00000592477 1447 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 NMD3P1-201ENST00000439704 1488 ntBASIC5.37□□□□□ -1.55
LONRF3Q496Y0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms