Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX4Q06945 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX4Q06945 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
SOX4Q06945 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX4Q06945 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SOX4Q06945 AC090017.1-201ENST00000548612 1779 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 ASNSP1-204ENST00000641977 1664 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 OR9K1P-201ENST00000326513 941 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 RNU4-2-201ENST00000365668 141 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SOX4Q06945 AC009804.1-201ENST00000400949 179 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX4Q06945 RPS7P15-201ENST00000415804 584 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 MRPL50P2-201ENST00000416821 482 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX4Q06945 RBMY2KP-201ENST00000418221 992 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 MTCO3P46-201ENST00000425787 232 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 OR51AB1P-201ENST00000429046 620 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 OR2B7P-201ENST00000429302 934 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 MTND3P2-201ENST00000438452 342 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 CACYBPP1-201ENST00000438592 684 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 AL596266.1-201ENST00000448132 400 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 RPS15AP36-201ENST00000492022 382 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 BX510359.5-201ENST00000515651 304 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 RNU6-1003P-201ENST00000517099 105 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX4Q06945 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX4Q06945 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX4Q06945 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.99□□□□□ -1.45
SOX4Q06945 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX4Q06945 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX4Q06945 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX4Q06945 NPM1P42-201ENST00000560329 862 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 MIR1269B-201ENST00000580405 75 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 AC007448.1-201ENST00000582714 234 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 RNU6-87P-201ENST00000607561 108 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 AC000068.2-201ENST00000608816 460 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 DISC2.1-201ENST00000612827 205 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 C2orf27A-204ENST00000623058 969 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX4Q06945 AC134503.1-201ENST00000633048 54 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX4Q06945 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SOX4Q06945 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX4Q06945 AC007996.1-201ENST00000620414 2821 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX4Q06945 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SOX4Q06945 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX4Q06945 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.99□□□□□ -1.45
SOX4Q06945 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX4Q06945 OR11H5P-202ENST00000641612 1325 ntBASIC5.99□□□□□ -1.45
SOX4Q06945 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SOX4Q06945 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 LINC00622-201ENST00000562811 1570 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX4Q06945 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 AP000432.2-201ENST00000624164 2048 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 RNA5SP514-201ENST00000363717 111 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 RNU1-136P-201ENST00000384181 164 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 RNU1-77P-201ENST00000390868 162 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 RN7SKP140-201ENST00000411196 284 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 AC127391.1-201ENST00000411737 98 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX4Q06945 AC007161.1-204ENST00000423039 460 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX4Q06945 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX4Q06945 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX4Q06945 Y_RNA.632-201ENST00000459189 102 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX4Q06945 AC110792.2-201ENST00000510278 224 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX4Q06945 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX4Q06945 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX4Q06945 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX4Q06945 AC125612.1-201ENST00000547580 377 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX4Q06945 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX4Q06945 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SOX4Q06945 AL109766.1-201ENST00000555080 552 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 MTCYBP13-201ENST00000578634 1093 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 MIR3171-201ENST00000584270 74 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 OR7E18P-201ENST00000592589 702 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 AL133173.2-201ENST00000614270 90 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 MIR6719-201ENST00000622428 87 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX4Q06945 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.98□□□□□ -1.45
SOX4Q06945 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX4Q06945 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX4Q06945 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX4Q06945 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms