Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.41□□□□□ -1.7
ABCD3P28288 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.41□□□□□ -1.7
ABCD3P28288 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 AC116618.1-201ENST00000634617 774 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ABCD3P28288 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ABCD3P28288 AL356489.2-201ENST00000566968 3528 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.41□□□□□ -1.7
ABCD3P28288 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ABCD3P28288 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
ABCD3P28288 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ABCD3P28288 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ABCD3P28288 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
ABCD3P28288 OR51H2P-202ENST00000641424 3046 ntBASIC4.4□□□□□ -1.7
ABCD3P28288 FAM91A3P-201ENST00000456826 2544 ntBASIC4.4□□□□□ -1.7
ABCD3P28288 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.4□□□□□ -1.7
ABCD3P28288 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ABCD3P28288 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.4□□□□□ -1.7
ABCD3P28288 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ABCD3P28288 SNRPEP3-201ENST00000338402 276 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.4□□□□□ -1.71
ABCD3P28288 MIR124-3-201ENST00000384866 87 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AL450338.1-201ENST00000407987 512 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 U3.35-201ENST00000408405 208 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.4□□□□□ -1.71
ABCD3P28288 RSU1P3-201ENST00000412878 835 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 BX510359.2-201ENST00000417920 305 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 OFD1P18Y-201ENST00000420889 959 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.4□□□□□ -1.71
ABCD3P28288 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
ABCD3P28288 HIGD1AP4-201ENST00000430194 280 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.4□□□□□ -1.71
ABCD3P28288 AL049745.1-201ENST00000433953 286 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 KCTD10P1-201ENST00000434203 625 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 MTND3P1-201ENST00000441336 220 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.4□□□□□ -1.71
ABCD3P28288 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.4□□□□□ -1.71
ABCD3P28288 EXTL2P1-201ENST00000446218 416 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 RPL12P26-201ENST00000452430 487 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.4□□□□□ -1.71
ABCD3P28288 SBDSP1-204ENST00000453858 737 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.4□□□□□ -1.71
ABCD3P28288 RPL5P30-201ENST00000465511 891 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 RPL7P18-201ENST00000478965 734 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 RPL7P38-201ENST00000488396 739 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 OR4G11P-201ENST00000492842 939 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AC091868.1-201ENST00000508746 304 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 NDUFB4P12-201ENST00000513465 390 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.4□□□□□ -1.71
ABCD3P28288 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.4□□□□□ -1.71
ABCD3P28288 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.4□□□□□ -1.71
ABCD3P28288 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.4□□□□□ -1.71
ABCD3P28288 AL354943.1-201ENST00000572103 781 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.4□□□□□ -1.71
ABCD3P28288 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.4□□□□□ -1.71
ABCD3P28288 AC245036.5-201ENST00000596330 847 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 VN1R82P-201ENST00000601481 356 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AC073091.2-201ENST00000603205 907 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AC004987.4-201ENST00000603383 338 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AC087283.1-201ENST00000604029 1074 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.4□□□□□ -1.71
ABCD3P28288 AC100827.5-201ENST00000615883 426 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AC009159.2-201ENST00000617603 606 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.4□□□□□ -1.71
ABCD3P28288 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.4□□□□□ -1.71
ABCD3P28288 MIR1322-201ENST00000638013 71 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.4□□□□□ -1.71
ABCD3P28288 AL442639.1-201ENST00000625030 1899 ntBASIC4.4□□□□□ -1.71
ABCD3P28288 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ABCD3P28288 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ABCD3P28288 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ABCD3P28288 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ABCD3P28288 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
ABCD3P28288 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
ABCD3P28288 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
ABCD3P28288 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
ABCD3P28288 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
ABCD3P28288 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ABCD3P28288 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ABCD3P28288 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ABCD3P28288 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.39□□□□□ -1.71
ABCD3P28288 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ABCD3P28288 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ABCD3P28288 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
ABCD3P28288 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ABCD3P28288 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ABCD3P28288 AC008549.2-201ENST00000333482 706 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 U3.15-201ENST00000365398 212 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 RNU1-82P-201ENST00000390851 165 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ABCD3P28288 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms