Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RNU6-352P-201ENST00000516908 107 ntBASIC3.56□□□□□ -1.84
SCN2BO60939 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN2BO60939 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCN2BO60939 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN2BO60939 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN2BO60939 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN2BO60939 AL392112.1-201ENST00000605115 829 ntBASIC3.56□□□□□ -1.84
SCN2BO60939 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN2BO60939 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SCN2BO60939 AF001550.2-201ENST00000636643 217 ntBASIC3.56□□□□□ -1.84
SCN2BO60939 AP001148.1-201ENST00000624124 2359 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCN2BO60939 AF127577.6-201ENST00000623352 2191 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN2BO60939 RNU6-283P-201ENST00000364788 107 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 RNA5SP189-201ENST00000364920 115 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 RNA5SP97-201ENST00000365006 84 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 RNU4-31P-201ENST00000384211 141 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 AL590290.1-201ENST00000405336 380 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 AC127526.1-201ENST00000417526 366 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN2BO60939 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCN2BO60939 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN2BO60939 BMS1P19-201ENST00000433925 393 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 NDUFB1P1-201ENST00000435191 180 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.55□□□□□ -1.84
SCN2BO60939 CYCSP43-201ENST00000438233 310 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN2BO60939 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN2BO60939 UBDP1-202ENST00000457888 382 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 AC007537.2-201ENST00000472093 511 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 AC078785.3-201ENST00000476607 425 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN2BO60939 AC078918.1-201ENST00000498515 228 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN2BO60939 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN2BO60939 RNU6-1231P-201ENST00000517185 103 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 MIR2116-201ENST00000517221 80 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 SOD1P3-201ENST00000518682 454 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 IGKV2-23-201ENST00000518729 323 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN2BO60939 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.55□□□□□ -1.84
SCN2BO60939 AC006960.3-201ENST00000561845 705 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.55□□□□□ -1.84
SCN2BO60939 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN2BO60939 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.55□□□□□ -1.84
SCN2BO60939 AC069304.3-201ENST00000603938 1084 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 AC135803.1-201ENST00000608748 565 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCN2BO60939 MIR6500-201ENST00000622700 86 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 AC048347.1-201ENST00000624621 427 ntBASIC3.55□□□□□ -1.84
SCN2BO60939 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN2BO60939 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SCN2BO60939 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCN2BO60939 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCN2BO60939 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
SCN2BO60939 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCN2BO60939 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN2BO60939 MTND5P3-201ENST00000438536 1800 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 SEPT7P7-201ENST00000420492 1301 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN2BO60939 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SCN2BO60939 SNORA70.2-201ENST00000364506 135 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 HSPE1P26-201ENST00000405341 275 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN2BO60939 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN2BO60939 AC002075.2-201ENST00000425207 252 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 RPS27AP12-201ENST00000429552 465 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN2BO60939 NANOGP10-201ENST00000453325 895 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 CYCSP53-201ENST00000455540 265 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 RPL37P3-201ENST00000456825 293 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 AC022034.3-201ENST00000471393 478 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN2BO60939 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN2BO60939 RNU4-60P-201ENST00000517239 135 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.54□□□□□ -1.84
SCN2BO60939 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN2BO60939 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN2BO60939 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN2BO60939 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCN2BO60939 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.54□□□□□ -1.84
SCN2BO60939 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
SCN2BO60939 AC015726.1-201ENST00000602353 681 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 AL606490.9-201ENST00000603331 271 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 AC006946.3-201ENST00000609791 756 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 ZYXP1-201ENST00000617638 118 ntBASIC3.54□□□□□ -1.84
SCN2BO60939 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN2BO60939 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN2BO60939 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN2BO60939 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.54□□□□□ -1.84
SCN2BO60939 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN2BO60939 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SCN2BO60939 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
SCN2BO60939 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN2BO60939 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SCN2BO60939 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SCN2BO60939 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SCN2BO60939 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SCN2BO60939 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms