Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX1O00570 RNU6-359P-201ENST00000365466 108 ntBASIC6.09□□□□□ -1.43
SOX1O00570 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SOX1O00570 NPM1P38-201ENST00000403835 865 ntBASIC6.09□□□□□ -1.43
SOX1O00570 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX1O00570 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX1O00570 ELOCP4-201ENST00000420090 333 ntBASIC6.09□□□□□ -1.43
SOX1O00570 AL353678.1-201ENST00000422735 741 ntBASIC6.09□□□□□ -1.43
SOX1O00570 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX1O00570 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX1O00570 AL606489.2-201ENST00000433886 234 ntBASIC6.09□□□□□ -1.43
SOX1O00570 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.09□□□□□ -1.43
SOX1O00570 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX1O00570 SDC4P-201ENST00000453285 601 ntBASIC6.09□□□□□ -1.43
SOX1O00570 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX1O00570 RPS15AP36-201ENST00000492022 382 ntBASIC6.09□□□□□ -1.43
SOX1O00570 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX1O00570 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
SOX1O00570 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX1O00570 AC103851.1-201ENST00000506833 274 ntBASIC6.09□□□□□ -1.43
SOX1O00570 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX1O00570 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX1O00570 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX1O00570 AC004980.4-201ENST00000513375 203 ntBASIC6.09□□□□□ -1.43
SOX1O00570 RNU6-941P-201ENST00000516346 108 ntBASIC6.09□□□□□ -1.43
SOX1O00570 RNA5SP400-201ENST00000517155 111 ntBASIC6.09□□□□□ -1.43
SOX1O00570 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX1O00570 IGKV2-36-201ENST00000519999 223 ntBASIC6.09□□□□□ -1.43
SOX1O00570 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.09□□□□□ -1.43
SOX1O00570 OR5M2P-201ENST00000529003 936 ntBASIC6.09□□□□□ -1.43
SOX1O00570 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX1O00570 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.09□□□□□ -1.43
SOX1O00570 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX1O00570 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX1O00570 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX1O00570 AC127381.1-201ENST00000555979 939 ntBASIC6.09□□□□□ -1.43
SOX1O00570 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX1O00570 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.09□□□□□ -1.43
SOX1O00570 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX1O00570 MIR3189-201ENST00000578735 73 ntBASIC6.09□□□□□ -1.43
SOX1O00570 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX1O00570 AL133215.3-201ENST00000609801 448 ntBASIC6.09□□□□□ -1.43
SOX1O00570 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX1O00570 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX1O00570 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX1O00570 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
SOX1O00570 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
SOX1O00570 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX1O00570 AC007114.2-201ENST00000576014 4281 ntBASIC6.09□□□□□ -1.43
SOX1O00570 BIN2P1-201ENST00000504996 1530 ntBASIC6.09□□□□□ -1.44
SOX1O00570 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SOX1O00570 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SOX1O00570 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.09□□□□□ -1.44
SOX1O00570 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
SOX1O00570 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
SOX1O00570 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX1O00570 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX1O00570 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX1O00570 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX1O00570 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SOX1O00570 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SOX1O00570 AC022905.1-201ENST00000503430 3048 ntBASIC6.08□□□□□ -1.44
SOX1O00570 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SOX1O00570 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX1O00570 RNU6-1120P-201ENST00000362988 108 ntBASIC6.08□□□□□ -1.44
SOX1O00570 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX1O00570 RNU6-657P-201ENST00000383904 107 ntBASIC6.08□□□□□ -1.44
SOX1O00570 RNU6-74P-201ENST00000384235 107 ntBASIC6.08□□□□□ -1.44
SOX1O00570 RNU6-456P-201ENST00000384493 107 ntBASIC6.08□□□□□ -1.44
SOX1O00570 RNU6-510P-201ENST00000391239 108 ntBASIC6.08□□□□□ -1.44
SOX1O00570 OR4K12P-201ENST00000406538 961 ntBASIC6.08□□□□□ -1.44
SOX1O00570 RNU2-6P-201ENST00000411404 190 ntBASIC6.08□□□□□ -1.44
SOX1O00570 NPM1P40-201ENST00000412758 733 ntBASIC6.08□□□□□ -1.44
SOX1O00570 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX1O00570 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX1O00570 AC068287.1-201ENST00000430283 295 ntBASIC6.08□□□□□ -1.44
SOX1O00570 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.08□□□□□ -1.44
SOX1O00570 AC236972.2-201ENST00000434979 310 ntBASIC6.08□□□□□ -1.44
SOX1O00570 RSU1P2-202ENST00000437884 485 ntBASIC6.08□□□□□ -1.44
SOX1O00570 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX1O00570 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX1O00570 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX1O00570 BX842559.2-201ENST00000451418 605 ntBASIC6.08□□□□□ -1.44
SOX1O00570 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX1O00570 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX1O00570 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX1O00570 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SOX1O00570 RPL5P12-201ENST00000477071 851 ntBASIC6.08□□□□□ -1.44
SOX1O00570 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX1O00570 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX1O00570 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX1O00570 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.08□□□□□ -1.44
SOX1O00570 RNU6-201P-201ENST00000517100 61 ntBASIC6.08□□□□□ -1.44
SOX1O00570 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX1O00570 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX1O00570 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX1O00570 PDCD5P1-201ENST00000543528 309 ntBASIC6.08□□□□□ -1.44
SOX1O00570 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.08□□□□□ -1.44
SOX1O00570 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX1O00570 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms