Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC107081.3-201ENST00000612715 2034 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AP002907.1-201ENST00000606361 1430 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.9□□□□□ -2.1
CHKB-CPT1BH3BT56 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CHKB-CPT1BH3BT56 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.9□□□□□ -2.1
CHKB-CPT1BH3BT56 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC107977.1-201ENST00000355745 939 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 RNA5SP424-201ENST00000390988 115 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 RNA5SP397-201ENST00000391323 118 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 HMGB3P18-201ENST00000406327 590 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR1289-1-201ENST00000408836 144 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 RNU6-1077P-201ENST00000410506 102 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 HSPE1P12-201ENST00000412576 301 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 ZNF736P2Y-201ENST00000416040 1279 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 UQCRBP1-201ENST00000421129 336 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 RPL23AP82-202ENST00000427528 469 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 XKRYP6-201ENST00000440468 1116 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 XKRYP3-201ENST00000442113 1116 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AL357552.1-201ENST00000445254 415 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 SUN3-208ENST00000453192 801 ntTSL 5 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 CENPBD1P1-201ENST00000464061 469 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 RPL35P6-201ENST00000490024 372 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 KRTAP5-14P-201ENST00000502328 121 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC093755.1-201ENST00000512950 1023 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 RNA5SP217-201ENST00000515959 91 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 RNA5SP96-201ENST00000516041 107 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC022826.1-201ENST00000519383 805 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC090616.5-202ENST00000582111 297 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC012119.1-201ENST00000603184 222 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 HMGN2P28-201ENST00000606102 262 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AL391497.1-201ENST00000608671 547 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AL121612.2-201ENST00000612261 482 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC127024.6-201ENST00000621598 424 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR6733-201ENST00000635723 61 ntBASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC1.9□□□□□ -2.11
CHKB-CPT1BH3BT56 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 U3.6-201ENST00000363622 211 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 RNU4-4P-201ENST00000364588 130 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AL583835.1-201ENST00000399570 407 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 RNA5SP44-201ENST00000410446 133 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC109780.2-201ENST00000413467 845 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 MTND4P11-201ENST00000417020 1058 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 ATG3P1-201ENST00000419507 911 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 ARL5AP2-201ENST00000444698 533 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 UBBP3-201ENST00000445497 241 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 UQCRHP3-201ENST00000451503 251 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 RN7SL604P-201ENST00000492589 296 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC072052.1-201ENST00000496556 306 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC024558.1-201ENST00000505008 528 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 MTND5P4-201ENST00000514978 288 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 RN7SKP13-201ENST00000515933 244 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 RNA5SP208-201ENST00000516156 78 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms