Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 PPP1R2P5-201ENST00000457256 603 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AC092324.1-201ENST00000468671 324 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 RNU6-1225P-201ENST00000516336 65 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AC008147.3-201ENST00000548666 354 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 TVP23CP2-201ENST00000571473 623 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 KPNA2P3-201ENST00000584190 848 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AC008966.2-201ENST00000606157 453 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AC233309.1-201ENST00000619522 751 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AL162373.1-201ENST00000620433 407 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 ZNF807-201ENST00000328088 1707 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 SAMMSON-210ENST00000641260 1308 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 Y_RNA.81-201ENST00000362997 102 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 RNU6-1032P-201ENST00000384100 107 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 AC016739.1-201ENST00000405359 345 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 AC139712.2-201ENST00000424302 339 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 BX323845.3-201ENST00000428215 527 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 HMGB3P22-202ENST00000451823 572 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 PCNPP5-201ENST00000452246 481 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 MTND1P12-201ENST00000455231 147 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 AC138409.2-202ENST00000507274 458 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 PSMA2P1-201ENST00000526365 646 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 AC087763.1-201ENST00000603391 286 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 FO393422.1-201ENST00000603908 708 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PDZRN3Q9UPQ7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AC073343.1-201ENST00000328239 651 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 SNORA69-201ENST00000383895 132 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AL121977.1-201ENST00000401636 979 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 RNU6-1304P-201ENST00000411374 106 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 BMS1P17-202ENST00000416720 316 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AL355433.1-201ENST00000422804 300 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AL161722.2-201ENST00000434731 981 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 RPL37P21-201ENST00000435890 276 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 CYCSP11-201ENST00000436426 315 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 HMGB1P12-201ENST00000438594 598 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AL162739.1-201ENST00000450606 307 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 HMGN2P25-201ENST00000486956 268 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AC067942.3-201ENST00000512025 362 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 NPM1P41-201ENST00000512920 831 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 RNA5SP34-201ENST00000516887 130 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 YWHABP2-201ENST00000540201 713 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 RPL21P5-201ENST00000554662 472 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AC138915.2-201ENST00000569776 97 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms