Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC008638.1-201ENST00000506035 866 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC034244.1-201ENST00000507687 207 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC008837.2-201ENST00000513076 418 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 NDUFB4P12-201ENST00000513465 390 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 FABP5P12-201ENST00000515543 389 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 OR5BC1P-201ENST00000529327 739 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 OR4A12P-201ENST00000530847 918 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 MTCO2P15-201ENST00000532655 656 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 OR8L1P-201ENST00000534005 955 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC023050.2-201ENST00000544968 387 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 MIR4737-201ENST00000583979 81 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AL031320.1-201ENST00000604177 357 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC107952.2-201ENST00000606048 486 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC092954.1-201ENST00000609121 445 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC121761.2-201ENST00000617300 689 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC069209.1-201ENST00000619282 651 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AL592148.3-201ENST00000608771 2646 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC026951.1-201ENST00000559530 2459 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 Y_RNA.25-201ENST00000362528 102 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 RNU5D-1-201ENST00000363299 116 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 MIR153-1-201ENST00000384914 90 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 ATP5F1P2-201ENST00000398143 760 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 SDHCP2-201ENST00000398565 501 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC004074.1-201ENST00000421810 1063 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC073648.4-201ENST00000442655 781 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 HIGD1AP8-201ENST00000453927 274 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 SCARNA10-201ENST00000459255 330 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 RPL5P30-201ENST00000465511 891 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC104763.1-201ENST00000475274 360 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 SETP14-201ENST00000497538 873 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 RNU2-30P-201ENST00000516209 141 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 IGKV1-32-201ENST00000519290 311 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AP000790.1-201ENST00000528891 737 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 DEFB109D-201ENST00000529497 240 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 OR4A45P-201ENST00000529954 901 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC005832.3-201ENST00000537929 631 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC010198.2-201ENST00000550612 259 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AL132657.2-201ENST00000564417 358 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC133644.2-201ENST00000608142 540 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 TUSC7.1-201ENST00000610969 165 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC092106.3-201ENST00000611308 722 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC107075.1-201ENST00000613695 314 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 U3.53-201ENST00000628922 216 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 ZNF137P-201ENST00000456718 1920 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AL391684.1-202ENST00000641293 1636 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms