Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC008885.2-201ENST00000509506 930 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 MTND5P13-201ENST00000513046 1079 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 HNRNPKP5-201ENST00000515300 253 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 Y_RNA.655-201ENST00000515919 96 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS50Q96JG6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.8□□□□□ -1.64
VPS50Q96JG6 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS50Q96JG6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS50Q96JG6 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VPS50Q96JG6 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS50Q96JG6 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 HMGB3P26-201ENST00000560051 582 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS50Q96JG6 HNRNPCP4-201ENST00000571636 900 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 MIR4700-201ENST00000578311 74 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 MIR4716-201ENST00000579628 84 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS50Q96JG6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.8□□□□□ -1.64
VPS50Q96JG6 AP001981.2-201ENST00000603241 418 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 AC018714.1-201ENST00000605028 208 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 AC024940.4-201ENST00000605507 246 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 AC012557.2-201ENST00000605919 418 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 Mico1.1-201ENST00000611698 204 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS50Q96JG6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 AC015804.1-201ENST00000622935 435 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 AC124312.6-202ENST00000623624 418 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
VPS50Q96JG6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS50Q96JG6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
VPS50Q96JG6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS50Q96JG6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
VPS50Q96JG6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS50Q96JG6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS50Q96JG6 AL049555.1-201ENST00000562834 1933 ntBASIC4.8□□□□□ -1.64
VPS50Q96JG6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS50Q96JG6 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS50Q96JG6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS50Q96JG6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS50Q96JG6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS50Q96JG6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS50Q96JG6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS50Q96JG6 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS50Q96JG6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 Y_RNA.311-201ENST00000365068 96 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 RPL21P108-201ENST00000413857 481 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC009237.10-201ENST00000414112 510 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 LUZP4P1-201ENST00000415420 344 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 COX6B1P1-201ENST00000415962 213 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 HSFY4P-201ENST00000415994 1181 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 RBMY2KP-201ENST00000418221 992 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 AL035407.1-201ENST00000429211 571 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 SKP1P3-201ENST00000429280 487 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 RPS25P9-201ENST00000435591 252 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 GEMIN8P3-201ENST00000445417 720 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC239809.1-201ENST00000450470 217 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC112198.1-201ENST00000505369 1220 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS50Q96JG6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC138915.2-201ENST00000569776 97 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 AL390838.2-201ENST00000602394 274 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 AL590229.1-201ENST00000603497 542 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC091488.1-201ENST00000604239 660 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 Z69908.1-201ENST00000622603 247 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 AC092435.4-201ENST00000623012 4159 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 SDAD1P1-202ENST00000524156 2051 ntBASIC4.79□□□□□ -1.64
VPS50Q96JG6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS50Q96JG6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms