Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-CQ95604 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.84□□□□□ -1.31
HLA-CQ95604 HSFY6P-201ENST00000445573 403 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 AC016696.1-201ENST00000446949 318 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 PCNPP5-201ENST00000452246 481 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 AC011225.1-201ENST00000457751 369 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.84□□□□□ -1.31
HLA-CQ95604 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 RPS27AP18-201ENST00000515536 459 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 RNU6-307P-201ENST00000516743 106 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 RNU6-699P-201ENST00000517081 110 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 IGKV2-18-201ENST00000522607 343 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.84□□□□□ -1.31
HLA-CQ95604 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.84□□□□□ -1.31
HLA-CQ95604 AC009229.3-201ENST00000608056 282 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-CQ95604 TRIM51HP-202ENST00000530412 1823 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-CQ95604 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.84□□□□□ -1.31
HLA-CQ95604 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-CQ95604 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-CQ95604 CYP2G2P-201ENST00000594920 1485 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-CQ95604 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HLA-CQ95604 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.84□□□□□ -1.32
HLA-CQ95604 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
HLA-CQ95604 CDC27P3-201ENST00000635418 1910 ntBASIC6.84□□□□□ -1.32
HLA-CQ95604 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.83□□□□□ -1.32
HLA-CQ95604 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.83□□□□□ -1.32
HLA-CQ95604 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.83□□□□□ -1.32
HLA-CQ95604 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
HLA-CQ95604 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.83□□□□□ -1.32
HLA-CQ95604 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 OR52B3P-201ENST00000314715 928 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 RN7SKP292-201ENST00000365522 317 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 RNU6-1050P-201ENST00000410388 107 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 RN7SKP106-201ENST00000410832 272 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 RN7SKP293-201ENST00000411389 296 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.83□□□□□ -1.32
HLA-CQ95604 UBE2V1P14-201ENST00000415815 558 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.83□□□□□ -1.32
HLA-CQ95604 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.83□□□□□ -1.32
HLA-CQ95604 CALM2P2-201ENST00000428512 440 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.83□□□□□ -1.32
HLA-CQ95604 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 ANKRD54P1-201ENST00000433115 471 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 AC092013.1-201ENST00000438795 332 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 RAC1P7-201ENST00000445367 377 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 RPL36AP39-201ENST00000445859 318 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.83□□□□□ -1.32
HLA-CQ95604 RPL21P6-201ENST00000479171 504 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 RN7SL382P-201ENST00000482631 282 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 AL139099.1-201ENST00000497398 403 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.83□□□□□ -1.32
HLA-CQ95604 RNU1-54P-201ENST00000517181 120 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.83□□□□□ -1.32
HLA-CQ95604 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.83□□□□□ -1.32
HLA-CQ95604 SAA3P-201ENST00000533267 365 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC6.83□□□□□ -1.32
HLA-CQ95604 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.83□□□□□ -1.32
HLA-CQ95604 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.83□□□□□ -1.32
HLA-CQ95604 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.83□□□□□ -1.32
HLA-CQ95604 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.83□□□□□ -1.32
HLA-CQ95604 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC6.83□□□□□ -1.32
HLA-CQ95604 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HLA-CQ95604 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.83□□□□□ -1.32
HLA-CQ95604 SNORD91A-202ENST00000609620 191 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 AC026464.2-201ENST00000567834 2421 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.83□□□□□ -1.32
HLA-CQ95604 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 AL136984.1-201ENST00000607611 1893 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.83□□□□□ -1.32
HLA-CQ95604 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
HLA-CQ95604 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-CQ95604 AC123769.2-201ENST00000624332 5984 ntBASIC6.83□□□□□ -1.32
HLA-CQ95604 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
HLA-CQ95604 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.83□□□□□ -1.32
HLA-CQ95604 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
HLA-CQ95604 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
HLA-CQ95604 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 MTND5P7-201ENST00000413558 1798 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms