Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 MTND6P33-201ENST00000571794 183 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL121834.1-201ENST00000572284 509 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC022726.1-201ENST00000587475 207 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 BNIP3P32-201ENST00000600015 554 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC090425.2-201ENST00000608818 501 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL590282.1-201ENST00000610379 1136 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC023043.4-201ENST00000612081 449 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC005332.6-201ENST00000613178 446 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL022401.1-201ENST00000619498 108 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 MIR7154-201ENST00000620673 73 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC048347.1-201ENST00000624621 427 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL031985.3-201ENST00000565390 2449 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC004925.1-201ENST00000624256 2706 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 NXPH1-205ENST00000602349 1953 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.15□□□□□ -1.9
LINC01561Q8N1V8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.15□□□□□ -1.9
LINC01561Q8N1V8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
LINC01561Q8N1V8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
LINC01561Q8N1V8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LINC01561Q8N1V8 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.15□□□□□ -1.9
LINC01561Q8N1V8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LINC01561Q8N1V8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LINC01561Q8N1V8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LINC01561Q8N1V8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.15□□□□□ -1.9
LINC01561Q8N1V8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
LINC01561Q8N1V8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 MIR323A-201ENST00000362199 86 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 SNORD82-201ENST00000365530 70 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 SNORA51.8-201ENST00000384234 132 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 MIR620-201ENST00000385232 95 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 SDHCP2-201ENST00000398565 501 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 Z98745.1-201ENST00000402553 494 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 FCF1P5-201ENST00000406490 482 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 RN7SKP267-201ENST00000410381 285 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 MTCO3P12-201ENST00000416718 547 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC004552.1-201ENST00000419089 348 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 RPL24P2-201ENST00000421023 475 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC093698.1-201ENST00000423843 571 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 SKP1P3-201ENST00000429280 487 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 CFL1P1-202ENST00000432948 411 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 RPL7P11-201ENST00000437586 658 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 PRPF38AP2-201ENST00000438179 851 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC127537.2-201ENST00000439258 465 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 VN1R32P-201ENST00000452234 905 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 HMGN2P7-201ENST00000456186 273 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 RPL23AP56-201ENST00000460778 453 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 RPS26P3-201ENST00000470205 348 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC090543.2-201ENST00000483963 348 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 MTCO3P35-201ENST00000485582 781 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC004057.1-201ENST00000485827 348 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC146944.2-203ENST00000502493 354 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC108078.3-201ENST00000502633 489 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC025445.1-201ENST00000502728 300 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 HMGB1P22-201ENST00000505315 124 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC006499.3-201ENST00000506077 748 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC006499.6-201ENST00000511169 607 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC093752.1-206ENST00000511823 336 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC139495.1-202ENST00000513164 354 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC015795.1-201ENST00000513669 327 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 RNU6-1261P-201ENST00000517194 104 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 IGKV2-18-201ENST00000522607 343 ntBASIC3.15□□□□□ -1.91
LINC01561Q8N1V8 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms