Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AC234772.3-201ENST00000602277 528 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AC022022.2-201ENST00000602989 360 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AC069304.3-201ENST00000603938 1084 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 MIR8069-1-201ENST00000616627 86 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 MIR8069-2-201ENST00000621412 86 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 MAPK10-304ENST00000641341 3984 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
HERC6Q8IVU3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
HERC6Q8IVU3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
HERC6Q8IVU3 AC135352.1-201ENST00000506173 1418 ntBASIC4.9□□□□□ -1.62
HERC6Q8IVU3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HERC6Q8IVU3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.9□□□□□ -1.62
HERC6Q8IVU3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HERC6Q8IVU3 SAGE2P-201ENST00000420011 2126 ntBASIC4.9□□□□□ -1.62
HERC6Q8IVU3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
HERC6Q8IVU3 AC025125.1-201ENST00000624743 1922 ntBASIC4.9□□□□□ -1.62
HERC6Q8IVU3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 RNU6-839P-201ENST00000363347 108 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 RNU6-1066P-201ENST00000363573 105 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 snoZ40.1-201ENST00000364540 72 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 RNU6-707P-201ENST00000364647 95 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 MIR670-201ENST00000390142 98 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 RN7SKP202-201ENST00000410439 330 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 NANOGP2-201ENST00000435391 727 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 GTF2IP7-202ENST00000436677 309 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 Z73417.1-201ENST00000447373 778 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 Z99714.1-201ENST00000450463 807 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 APOOP2-201ENST00000461561 539 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 RN7SL542P-201ENST00000467147 294 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AC109471.1-201ENST00000511631 612 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 RNA5SP249-201ENST00000516127 99 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AC084757.1-201ENST00000559987 490 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AC090515.3-201ENST00000560431 315 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AC090695.1-201ENST00000561269 1222 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 MIR6864-201ENST00000617935 70 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AL356863.1-201ENST00000623378 1080 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 AL512506.2-201ENST00000624472 458 ntBASIC4.9□□□□□ -1.63
HERC6Q8IVU3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HERC6Q8IVU3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC006971.1-201ENST00000407916 4486 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AP005901.5-201ENST00000545779 1796 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 SNORA40.2-201ENST00000390847 128 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 ARL4AP5-201ENST00000404372 599 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 FCF1P5-201ENST00000406490 482 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AL356320.2-201ENST00000417263 507 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 HMGB1P49-201ENST00000418882 569 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC007435.1-201ENST00000421086 415 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 OR2X1P-201ENST00000421144 687 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 RGS17P1-201ENST00000423358 553 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 HMGB3P5-201ENST00000428894 612 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 CEACAMP1-201ENST00000434624 1035 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms