Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.29□□□□□ -1.56
EIF4A1P60842 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
EIF4A1P60842 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EIF4A1P60842 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.29□□□□□ -1.56
EIF4A1P60842 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.29□□□□□ -1.56
EIF4A1P60842 HMGB1P49-201ENST00000418882 569 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.29□□□□□ -1.56
EIF4A1P60842 AC073335.1-201ENST00000427776 363 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 HIGD1AP4-201ENST00000430194 280 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 AL358472.1-201ENST00000431295 329 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.29□□□□□ -1.56
EIF4A1P60842 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.29□□□□□ -1.56
EIF4A1P60842 AL353093.1-201ENST00000441292 436 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 MTND2P22-201ENST00000444325 1033 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 HMGB3P6-201ENST00000444896 598 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 AC005410.1-202ENST00000460347 485 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 RPL38P1-201ENST00000460914 211 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 RPL7P1-201ENST00000468161 747 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 RPL7P9-201ENST00000468715 747 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.29□□□□□ -1.56
EIF4A1P60842 AC008694.2-201ENST00000517591 306 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.29□□□□□ -1.56
EIF4A1P60842 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.29□□□□□ -1.56
EIF4A1P60842 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.29□□□□□ -1.56
EIF4A1P60842 AC025260.1-201ENST00000548858 430 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.29□□□□□ -1.56
EIF4A1P60842 SETP1-201ENST00000556014 845 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 AL132657.2-201ENST00000564417 358 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 MIR1254-2-201ENST00000579553 63 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 MIR4286-201ENST00000580651 93 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 MIR5684-201ENST00000585074 65 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 AC092106.3-201ENST00000611308 722 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 AL138478.1-201ENST00000612252 832 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 AC093783.1-201ENST00000612976 329 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.29□□□□□ -1.56
EIF4A1P60842 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
EIF4A1P60842 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EIF4A1P60842 AC073055.1-201ENST00000456901 1621 ntBASIC5.29□□□□□ -1.56
EIF4A1P60842 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
EIF4A1P60842 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EIF4A1P60842 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
EIF4A1P60842 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EIF4A1P60842 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EIF4A1P60842 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.28□□□□□ -1.56
EIF4A1P60842 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.28□□□□□ -1.56
EIF4A1P60842 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
EIF4A1P60842 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.28□□□□□ -1.56
EIF4A1P60842 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
EIF4A1P60842 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.28□□□□□ -1.56
EIF4A1P60842 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
EIF4A1P60842 AL445189.1-201ENST00000405722 338 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 RN7SKP222-201ENST00000410651 315 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 RNU4-6P-201ENST00000410804 122 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 RNA5SP498-201ENST00000411342 120 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 TAF13P2-201ENST00000416876 286 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
EIF4A1P60842 RPS6P15-201ENST00000431996 751 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 MTCYBP42-201ENST00000444653 1130 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.28□□□□□ -1.56
EIF4A1P60842 RNU7-140P-201ENST00000459546 60 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 AC011037.1-201ENST00000483964 558 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 AC020593.1-201ENST00000507399 299 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.28□□□□□ -1.56
EIF4A1P60842 DEFB130C-202ENST00000530001 230 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 AC095057.3-201ENST00000567102 1157 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 AGGF1P6-201ENST00000569213 976 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.28□□□□□ -1.56
EIF4A1P60842 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
EIF4A1P60842 AC061975.8-201ENST00000587058 721 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.28□□□□□ -1.56
EIF4A1P60842 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.28□□□□□ -1.56
EIF4A1P60842 AC091304.6-201ENST00000619761 202 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 AP002782.1-201ENST00000623107 614 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 AC079416.3-201ENST00000624479 549 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 AL121594.5-201ENST00000631724 573 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.28□□□□□ -1.56
EIF4A1P60842 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 AC012321.1-201ENST00000561622 1588 ntBASIC5.28□□□□□ -1.56
EIF4A1P60842 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
EIF4A1P60842 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
EIF4A1P60842 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
EIF4A1P60842 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.27□□□□□ -1.57
EIF4A1P60842 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
EIF4A1P60842 AC092162.3-201ENST00000624511 1624 ntBASIC5.27□□□□□ -1.57
EIF4A1P60842 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
EIF4A1P60842 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
EIF4A1P60842 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms