Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL592293.2-201ENST00000422292 996 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.23□□□□□ -1.57
GFRA1P56159 AL035410.1-201ENST00000427409 427 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 USP9YP9-201ENST00000429406 715 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 SUMO2P3-201ENST00000438311 288 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 RPL7P54-201ENST00000438336 674 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AC064862.4-201ENST00000442180 334 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 RPL7P52-201ENST00000449200 742 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 RPS23P6-201ENST00000466136 431 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.23□□□□□ -1.57
GFRA1P56159 RPS29P25-201ENST00000481709 171 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AC022215.1-201ENST00000481770 362 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 EIF3LP3-201ENST00000495197 822 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 AC104109.1-201ENST00000498563 436 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AC091951.2-201ENST00000500762 203 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AC018710.1-201ENST00000506509 158 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AC110792.2-201ENST00000510278 224 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 TOMM22P4-201ENST00000511318 336 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 RNU6-875P-201ENST00000516488 106 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 CYCSP22-201ENST00000517555 339 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 OR4R3P-201ENST00000525084 838 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AF235103.2-201ENST00000525753 346 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.23□□□□□ -1.57
GFRA1P56159 AP000907.2-201ENST00000530827 353 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.23□□□□□ -1.57
GFRA1P56159 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.23□□□□□ -1.57
GFRA1P56159 AC068993.1-201ENST00000546724 589 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.23□□□□□ -1.57
GFRA1P56159 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.23□□□□□ -1.57
GFRA1P56159 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
GFRA1P56159 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.23□□□□□ -1.57
GFRA1P56159 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 AL356432.3-201ENST00000568952 465 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
GFRA1P56159 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 AC006115.2-201ENST00000596823 202 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 AC126175.1-201ENST00000617041 758 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 AC091953.2-201ENST00000623979 160 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
GFRA1P56159 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA1P56159 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.22□□□□□ -1.57
GFRA1P56159 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
GFRA1P56159 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.22□□□□□ -1.57
GFRA1P56159 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.22□□□□□ -1.57
GFRA1P56159 AL161756.3-201ENST00000641216 2071 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA1P56159 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.22□□□□□ -1.57
GFRA1P56159 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA1P56159 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.22□□□□□ -1.57
GFRA1P56159 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA1P56159 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA1P56159 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA1P56159 RNU6-97P-201ENST00000363387 104 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 Y_RNA.159-201ENST00000363674 87 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 RN7SKP69-201ENST00000365390 305 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 SNORD82-201ENST00000365530 70 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 RN7SKP81-201ENST00000365603 331 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.22□□□□□ -1.57
GFRA1P56159 AC092642.1-201ENST00000392417 425 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 HMGB1P20-201ENST00000402555 677 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.22□□□□□ -1.57
GFRA1P56159 SNRPEP10-201ENST00000420249 274 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 RPL34P3-201ENST00000421454 338 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.22□□□□□ -1.57
GFRA1P56159 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.22□□□□□ -1.57
GFRA1P56159 PSMA6P3-201ENST00000428242 164 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 AC096775.1-201ENST00000437724 448 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 AL049734.2-201ENST00000441066 616 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.22□□□□□ -1.57
GFRA1P56159 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.22□□□□□ -1.57
GFRA1P56159 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.22□□□□□ -1.57
GFRA1P56159 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA1P56159 AC004129.2-201ENST00000457229 287 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 RNU1-88P-201ENST00000459274 128 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 AC010683.1-201ENST00000473673 378 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 RN7SL809P-201ENST00000482040 297 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.22□□□□□ -1.57
GFRA1P56159 AC009120.1-201ENST00000493458 473 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.22□□□□□ -1.57
GFRA1P56159 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.22□□□□□ -1.57
GFRA1P56159 LRRC34P2-201ENST00000514850 553 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 AC139365.2-201ENST00000517972 253 ntBASIC5.22□□□□□ -1.57
GFRA1P56159 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms