Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM4SF1P30408 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.95□□□□□ -1.62
TM4SF1P30408 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TM4SF1P30408 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM4SF1P30408 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TM4SF1P30408 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.94□□□□□ -1.62
TM4SF1P30408 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TM4SF1P30408 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
TM4SF1P30408 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
TM4SF1P30408 RNA5SP97-201ENST00000365006 84 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 RNU6-207P-201ENST00000384137 107 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TM4SF1P30408 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TM4SF1P30408 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TM4SF1P30408 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.94□□□□□ -1.62
TM4SF1P30408 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.94□□□□□ -1.62
TM4SF1P30408 RPS20P1-201ENST00000434853 354 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TM4SF1P30408 AC104978.1-201ENST00000449387 391 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 PPIAP3-201ENST00000450588 505 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.94□□□□□ -1.62
TM4SF1P30408 RPS4XP6-201ENST00000477670 797 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.94□□□□□ -1.62
TM4SF1P30408 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.94□□□□□ -1.62
TM4SF1P30408 AC087369.1-201ENST00000520775 996 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.94□□□□□ -1.62
TM4SF1P30408 AC008562.1-201ENST00000521763 330 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 AC104115.2-201ENST00000523026 687 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TM4SF1P30408 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.94□□□□□ -1.62
TM4SF1P30408 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.94□□□□□ -1.62
TM4SF1P30408 MIR5187-201ENST00000583479 76 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 MIR5195-201ENST00000583555 115 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 VN1R92P-201ENST00000598511 928 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.94□□□□□ -1.62
TM4SF1P30408 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 AC022106.2-201ENST00000620114 757 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.94□□□□□ -1.62
TM4SF1P30408 ATE1-AS1-202ENST00000636460 506 ntBASIC4.94□□□□□ -1.62
TM4SF1P30408 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
TM4SF1P30408 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
TM4SF1P30408 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.94□□□□□ -1.62
TM4SF1P30408 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.93□□□□□ -1.62
TM4SF1P30408 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
TM4SF1P30408 MTCO1P12-201ENST00000414273 1543 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AC134882.1-201ENST00000603738 1676 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AL049781.1-201ENST00000623195 3585 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TM4SF1P30408 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.93□□□□□ -1.62
TM4SF1P30408 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TM4SF1P30408 RNU6-1000P-201ENST00000391066 106 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 ZNF602P-201ENST00000405929 924 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.93□□□□□ -1.62
TM4SF1P30408 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.93□□□□□ -1.62
TM4SF1P30408 PTP4A1P7-201ENST00000423476 514 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.93□□□□□ -1.62
TM4SF1P30408 DYNLL1P7-201ENST00000429273 258 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 HSFY7P-201ENST00000432672 318 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 HSFY8P-201ENST00000437934 318 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.93□□□□□ -1.62
TM4SF1P30408 RPS7P5-201ENST00000441482 581 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 YWHAQP9-201ENST00000445891 512 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 GXYLT1P1-201ENST00000446657 490 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.93□□□□□ -1.62
TM4SF1P30408 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.93□□□□□ -1.62
TM4SF1P30408 HSFY5P-201ENST00000453726 309 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.93□□□□□ -1.62
TM4SF1P30408 AC018635.1-201ENST00000468292 1030 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AL358832.1-201ENST00000497800 389 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.93□□□□□ -1.62
TM4SF1P30408 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.93□□□□□ -1.62
TM4SF1P30408 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.93□□□□□ -1.62
TM4SF1P30408 RN7SKP46-201ENST00000515942 234 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
TM4SF1P30408 MTND5P21-201ENST00000531961 522 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.93□□□□□ -1.62
TM4SF1P30408 AC007599.1-201ENST00000568688 1174 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 MIR4789-201ENST00000577469 82 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AP000919.1-202ENST00000581139 1264 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.93□□□□□ -1.62
TM4SF1P30408 AC008507.2-201ENST00000588402 1176 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 PCNAP1-202ENST00000595299 752 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AC244505.7-201ENST00000599675 272 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 RNU1-30P-201ENST00000606575 163 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 U3.45-201ENST00000607547 219 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
TM4SF1P30408 AC123768.4-201ENST00000616244 701 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AC007275.1-201ENST00000621243 671 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.93□□□□□ -1.62
TM4SF1P30408 AF001550.2-201ENST00000636643 217 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 AP002001.2-201ENST00000529025 1469 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TM4SF1P30408 AC090971.4-201ENST00000560291 1800 ntBASIC4.93□□□□□ -1.62
TM4SF1P30408 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.93□□□□□ -1.62
TM4SF1P30408 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TM4SF1P30408 AC114546.3-201ENST00000623582 1734 ntBASIC4.92□□□□□ -1.62
TM4SF1P30408 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM4SF1P30408 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms