Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 HIGD1AP8-201ENST00000453927 274 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.6□□□□□ -1.67
TNFSF4P23510 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TNFSF4P23510 RPL31P3-201ENST00000458430 332 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 POU5F1P7-201ENST00000508759 541 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.6□□□□□ -1.67
TNFSF4P23510 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.6□□□□□ -1.67
TNFSF4P23510 IGLV2-28-201ENST00000520681 304 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.6□□□□□ -1.67
TNFSF4P23510 DEFB109D-201ENST00000529497 240 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.6□□□□□ -1.67
TNFSF4P23510 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.6□□□□□ -1.67
TNFSF4P23510 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.6□□□□□ -1.67
TNFSF4P23510 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.6□□□□□ -1.67
TNFSF4P23510 RN7SL753P-201ENST00000581238 290 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.6□□□□□ -1.67
TNFSF4P23510 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TNFSF4P23510 AL031985.2-201ENST00000600955 480 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 AC103792.1-201ENST00000603591 919 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 AC112187.2-201ENST00000604345 283 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 IGHV3-29-201ENST00000604817 344 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 AL390208.1-201ENST00000605885 644 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 AC092354.1-201ENST00000606057 376 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 MIR6862-1-201ENST00000613016 70 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 MIR6862-2-201ENST00000614755 70 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 AC009090.3-201ENST00000616553 565 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TNFSF4P23510 MIR6729-201ENST00000618194 65 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.6□□□□□ -1.67
TNFSF4P23510 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
TNFSF4P23510 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 AL356266.1-201ENST00000623311 483 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 CR381572.1-201ENST00000625098 102 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.6□□□□□ -1.67
TNFSF4P23510 AC092192.1-201ENST00000633154 1018 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TNFSF4P23510 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.6□□□□□ -1.67
TNFSF4P23510 CR383658.2-201ENST00000547576 1525 ntBASIC4.6□□□□□ -1.67
TNFSF4P23510 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TNFSF4P23510 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.6□□□□□ -1.67
TNFSF4P23510 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TNFSF4P23510 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.6□□□□□ -1.67
TNFSF4P23510 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.6□□□□□ -1.67
TNFSF4P23510 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.6□□□□□ -1.67
TNFSF4P23510 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TNFSF4P23510 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.6□□□□□ -1.67
TNFSF4P23510 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TNFSF4P23510 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
TNFSF4P23510 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TNFSF4P23510 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
TNFSF4P23510 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
TNFSF4P23510 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TNFSF4P23510 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
TNFSF4P23510 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
TNFSF4P23510 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
TNFSF4P23510 SNORA51.1-201ENST00000363243 140 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 RNA5SP335-201ENST00000363817 110 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 RNU6-289P-201ENST00000364093 107 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TNFSF4P23510 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.59□□□□□ -1.67
TNFSF4P23510 SNORA70.6-201ENST00000383934 134 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 MIR105-1-201ENST00000385222 81 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 RNU1-77P-201ENST00000390868 162 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 AL133388.1-201ENST00000404509 287 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 MIR1305-201ENST00000408300 86 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFSF4P23510 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.59□□□□□ -1.67
TNFSF4P23510 NCLP2-201ENST00000416078 1462 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 AC092647.1-201ENST00000420654 287 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFSF4P23510 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.59□□□□□ -1.67
TNFSF4P23510 ZNF833P-201ENST00000424938 1494 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 RWDD4P2-201ENST00000426392 563 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.59□□□□□ -1.67
TNFSF4P23510 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.59□□□□□ -1.67
TNFSF4P23510 AL136231.1-201ENST00000429407 730 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 AC129850.1-201ENST00000436203 508 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 AL162388.1-201ENST00000450912 352 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 ZNF114P1-201ENST00000453500 292 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.59□□□□□ -1.67
TNFSF4P23510 snoU109.4-201ENST00000458953 143 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 snoU13.3-201ENST00000459441 104 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 AP001992.1-205ENST00000462248 379 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 RPL30P9-201ENST00000465586 330 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TNFSF4P23510 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TNFSF4P23510 AC109486.1-201ENST00000486833 374 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 RPS4XP15-201ENST00000489210 795 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
TNFSF4P23510 AC012170.1-201ENST00000495139 359 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 DCAF13P1-201ENST00000495256 1330 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 AC006499.5-201ENST00000505037 514 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 AC021678.1-201ENST00000505195 936 ntBASIC4.59□□□□□ -1.67
TNFSF4P23510 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFSF4P23510 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFSF4P23510 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.59□□□□□ -1.67
TNFSF4P23510 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFSF4P23510 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFSF4P23510 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms