Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ALDH1A1P00352 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ALDH1A1P00352 RNU105B-201ENST00000364478 208 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 Y_RNA.364-201ENST00000365532 101 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 RNU6-730P-201ENST00000383954 104 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 Y_RNA.455-201ENST00000384230 98 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 RPL37P18-201ENST00000411602 243 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 RBMY2KP-201ENST00000418221 992 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 EEF1B2P6-201ENST00000445713 673 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 AC104308.1-201ENST00000454621 333 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 RPS4XP18-201ENST00000495480 763 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 RNU4-29P-201ENST00000515943 174 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 HMGB1P23-201ENST00000518743 568 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 AP001804.3-201ENST00000525146 880 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 AC018889.1-201ENST00000605372 397 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 AC024940.4-201ENST00000605507 246 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 MIR6837-201ENST00000620884 64 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ALDH1A1P00352 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.98□□□□□ -1.29
ALDH1A1P00352 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
ALDH1A1P00352 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
ALDH1A1P00352 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ALDH1A1P00352 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ALDH1A1P00352 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ALDH1A1P00352 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.98□□□□□ -1.29
ALDH1A1P00352 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 PABPC1P6-201ENST00000445594 1829 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 RN7SKP115-201ENST00000363177 317 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 RNA5SP478-201ENST00000364657 115 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 MIR548I2-201ENST00000408348 149 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 RPS15AP30-201ENST00000420976 390 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 MGAT2P1-201ENST00000449718 797 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 GAPDHP14-201ENST00000450472 937 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 PRPF38AP1-201ENST00000451976 933 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 PCNPP5-201ENST00000452246 481 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 RPL5P30-201ENST00000465511 891 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 GMFBP1-201ENST00000467831 427 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 RNU6-1088P-201ENST00000516850 104 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 POLR2KP1-201ENST00000553226 168 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 AC124068.1-201ENST00000563131 678 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 AC113195.1-201ENST00000579952 141 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 AL359704.2-201ENST00000604335 521 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 AC098479.1-201ENST00000609225 154 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 AC007546.1-201ENST00000619452 559 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 AL049780.3-201ENST00000624612 1583 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 API5P2-201ENST00000397055 1498 ntBASIC6.97□□□□□ -1.29
ALDH1A1P00352 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
ALDH1A1P00352 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ALDH1A1P00352 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ALDH1A1P00352 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
ALDH1A1P00352 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.96□□□□□ -1.29
ALDH1A1P00352 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
ALDH1A1P00352 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms