Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.43□□□□□ -1.54
RIMBP3Q9UFD9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.43□□□□□ -1.54
RIMBP3Q9UFD9 AC027281.1-201ENST00000574178 758 ntBASIC5.43□□□□□ -1.54
RIMBP3Q9UFD9 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RIMBP3Q9UFD9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIMBP3Q9UFD9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIMBP3Q9UFD9 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RIMBP3Q9UFD9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC5.43□□□□□ -1.54
RIMBP3Q9UFD9 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.43□□□□□ -1.54
RIMBP3Q9UFD9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 AC022031.1-201ENST00000585985 2593 ntBASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 AL672296.1-201ENST00000427780 2158 ntBASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 AC007899.1-201ENST00000412776 775 ntBASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 PPBPP1-201ENST00000510807 373 ntBASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 RN7SKP244-201ENST00000516513 307 ntBASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 MIR3936-201ENST00000584304 110 ntBASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 AL162713.1-201ENST00000604480 262 ntBASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 AP000255.1-201ENST00000610276 676 ntBASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 AL732618.1-201ENST00000623251 301 ntBASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
RIMBP3Q9UFD9 JKAMPP1-201ENST00000413804 919 ntBASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 RPS29P31-201ENST00000446147 164 ntBASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 USP9YP2-201ENST00000504503 1000 ntBASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 USP9YP1-201ENST00000513521 1002 ntBASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 AC023389.2-201ENST00000580031 955 ntBASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 FAM133CP-201ENST00000332869 704 ntBASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 MIR764-201ENST00000390811 85 ntBASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 AC026979.4-201ENST00000606555 645 ntBASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 AL590808.1-201ENST00000618696 141 ntBASIC5.41□□□□□ -1.54
RIMBP3Q9UFD9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
RIMBP3Q9UFD9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
RIMBP3Q9UFD9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RIMBP3Q9UFD9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 DYNLL1P7-201ENST00000429273 258 ntBASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 VN1R40P-201ENST00000455196 941 ntBASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 RNA5SP103-201ENST00000459503 118 ntBASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 HMGB3P13-201ENST00000511263 607 ntBASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
RIMBP3Q9UFD9 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 AL691447.1-201ENST00000419456 387 ntBASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 AL513174.1-201ENST00000423182 629 ntBASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 NPM1P39-201ENST00000449818 867 ntBASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 HMGN2P7-201ENST00000456186 273 ntBASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 snoU13.23-201ENST00000458863 104 ntBASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 AC114781.4-201ENST00000513707 639 ntBASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 HSPA8P4-201ENST00000511877 1920 ntBASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIMBP3Q9UFD9 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RIMBP3Q9UFD9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RIMBP3Q9UFD9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RIMBP3Q9UFD9 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.38□□□□□ -1.55
RIMBP3Q9UFD9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.38□□□□□ -1.55
RIMBP3Q9UFD9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.38□□□□□ -1.55
RIMBP3Q9UFD9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms