Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TRBV8-2-201ENST00000475637 270 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.53□□□□□ -1.84
VGLL1Q99990 AC104687.1-201ENST00000485829 412 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.53□□□□□ -1.84
VGLL1Q99990 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.53□□□□□ -1.84
VGLL1Q99990 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.53□□□□□ -1.84
VGLL1Q99990 AC011411.1-201ENST00000509592 876 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AC079395.1-201ENST00000510981 262 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.53□□□□□ -1.84
VGLL1Q99990 HMGB1P23-201ENST00000518743 568 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.53□□□□□ -1.84
VGLL1Q99990 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VGLL1Q99990 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.53□□□□□ -1.84
VGLL1Q99990 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VGLL1Q99990 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.53□□□□□ -1.84
VGLL1Q99990 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VGLL1Q99990 AC069240.1-201ENST00000548774 375 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AC024909.2-201ENST00000553035 286 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 POLR2KP1-201ENST00000553226 168 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.53□□□□□ -1.84
VGLL1Q99990 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.53□□□□□ -1.84
VGLL1Q99990 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.53□□□□□ -1.84
VGLL1Q99990 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.53□□□□□ -1.84
VGLL1Q99990 RN7SL802P-201ENST00000577858 299 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 MIR3915-201ENST00000578518 97 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.53□□□□□ -1.84
VGLL1Q99990 AC022726.1-201ENST00000587475 207 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AC006116.3-201ENST00000592968 361 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.53□□□□□ -1.84
VGLL1Q99990 AC008638.3-201ENST00000603341 463 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AP000811.1-201ENST00000603803 651 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.53□□□□□ -1.84
VGLL1Q99990 AP001521.2-201ENST00000608772 546 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AC055764.2-201ENST00000610089 670 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 EIF3FP1-201ENST00000613970 806 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AC008121.2-201ENST00000614647 523 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 MIR6886-201ENST00000619864 61 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 MIR7154-201ENST00000620673 73 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 Z69908.1-201ENST00000622603 247 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VGLL1Q99990 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VGLL1Q99990 LINC01739-205ENST00000641890 573 ntBASIC3.53□□□□□ -1.84
VGLL1Q99990 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VGLL1Q99990 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VGLL1Q99990 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VGLL1Q99990 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
VGLL1Q99990 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.53□□□□□ -1.84
VGLL1Q99990 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VGLL1Q99990 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.53□□□□□ -1.84
VGLL1Q99990 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VGLL1Q99990 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VGLL1Q99990 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VGLL1Q99990 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.53□□□□□ -1.84
VGLL1Q99990 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.53□□□□□ -1.85
VGLL1Q99990 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
VGLL1Q99990 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
VGLL1Q99990 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.52□□□□□ -1.85
VGLL1Q99990 AC025263.3-201ENST00000622965 1396 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VGLL1Q99990 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VGLL1Q99990 DCAF13P3-201ENST00000561147 1334 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VGLL1Q99990 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.52□□□□□ -1.85
VGLL1Q99990 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VGLL1Q99990 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VGLL1Q99990 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.52□□□□□ -1.85
VGLL1Q99990 SNORA51.1-201ENST00000363243 140 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
VGLL1Q99990 RNU6-1200P-201ENST00000384162 107 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 MIR525-201ENST00000384978 85 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 AL589647.1-201ENST00000402485 466 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.52□□□□□ -1.85
VGLL1Q99990 NRBF2P2-201ENST00000413087 861 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VGLL1Q99990 AC114755.2-201ENST00000413520 361 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.52□□□□□ -1.85
VGLL1Q99990 AC019050.1-201ENST00000418508 492 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.52□□□□□ -1.85
VGLL1Q99990 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.52□□□□□ -1.85
VGLL1Q99990 AL139421.1-201ENST00000423010 169 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 AL035407.1-201ENST00000429211 571 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 USP9YP31-201ENST00000431405 881 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.52□□□□□ -1.85
VGLL1Q99990 MTCO2P16-201ENST00000436962 677 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 AP000936.3-201ENST00000438127 255 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 AL354941.1-201ENST00000438600 464 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.52□□□□□ -1.85
VGLL1Q99990 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.52□□□□□ -1.85
VGLL1Q99990 AC010733.1-201ENST00000451515 401 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 RFC5P1-201ENST00000454419 874 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 BX248409.1-201ENST00000455497 255 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VGLL1Q99990 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.52□□□□□ -1.85
VGLL1Q99990 RPL5P24-201ENST00000463742 885 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 RPS26P28-201ENST00000470806 348 ntBASIC3.52□□□□□ -1.85
VGLL1Q99990 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.52□□□□□ -1.85
VGLL1Q99990 SYPL1P1-201ENST00000473622 768 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms