Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC010928.1-201ENST00000592477 1447 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC025574.1-201ENST00000554784 1653 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 RPL23AP57-201ENST00000332361 466 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 RN7SKP78-201ENST00000364711 318 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 RN7SKP292-201ENST00000365522 317 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 PRRC2CP1-201ENST00000404428 159 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AL078604.1-201ENST00000404609 466 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 RPS20P15-201ENST00000412792 311 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 PRELID3BP11-201ENST00000414230 479 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 TPMTP2-201ENST00000414372 726 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 RPL34P3-201ENST00000421454 338 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 RPL7P57-201ENST00000423238 740 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AP000936.3-201ENST00000438127 255 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AL161636.2-201ENST00000445179 927 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 OR7E116P-201ENST00000448529 957 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 SNRPGP6-201ENST00000451124 220 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC016724.1-201ENST00000453215 421 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 snoU13.29-201ENST00000459370 104 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC026410.2-201ENST00000460281 156 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 RPL7P51-201ENST00000490532 749 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC104109.1-201ENST00000498563 436 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 RNU6-445P-201ENST00000516949 107 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC104986.1-201ENST00000517978 436 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC027026.1-201ENST00000532323 742 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC096996.1-201ENST00000563813 325 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 MIR98-201ENST00000606724 119 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC093788.1-201ENST00000609356 927 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC009159.1-201ENST00000618386 642 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC112204.3-201ENST00000623822 332 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC099654.6-201ENST00000636487 512 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC097063.1-201ENST00000426714 1797 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC092162.3-201ENST00000624511 1624 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 AC016745.2-201ENST00000608834 3443 ntBASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD1Q96NR3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCHD1Q96NR3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PTCHD1Q96NR3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTCHD1Q96NR3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCHD1Q96NR3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCHD1Q96NR3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms