Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.07□□□□□ -1.76
C11orf88Q6PI97 AC020910.2-201ENST00000603635 610 ntBASIC4.07□□□□□ -1.76
C11orf88Q6PI97 AL445435.1-201ENST00000604232 665 ntBASIC4.07□□□□□ -1.76
C11orf88Q6PI97 AC091979.2-201ENST00000607514 214 ntBASIC4.07□□□□□ -1.76
C11orf88Q6PI97 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
C11orf88Q6PI97 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.07□□□□□ -1.76
C11orf88Q6PI97 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.07□□□□□ -1.76
C11orf88Q6PI97 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.07□□□□□ -1.76
C11orf88Q6PI97 MAPK10-372ENST00000641954 3413 ntBASIC4.07□□□□□ -1.76
C11orf88Q6PI97 AF127577.6-201ENST00000623352 2191 ntBASIC4.07□□□□□ -1.76
C11orf88Q6PI97 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
C11orf88Q6PI97 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
C11orf88Q6PI97 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.07□□□□□ -1.76
C11orf88Q6PI97 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
C11orf88Q6PI97 AC008758.3-201ENST00000507003 1829 ntBASIC4.07□□□□□ -1.76
C11orf88Q6PI97 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
C11orf88Q6PI97 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.07□□□□□ -1.76
C11orf88Q6PI97 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
C11orf88Q6PI97 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 OR4A15-201ENST00000314706 1035 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 SNORD6-201ENST00000365444 73 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 RNA5SP87-201ENST00000384155 118 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 RNU6-837P-201ENST00000391056 108 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC096533.1-201ENST00000411645 353 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 EI24P1-201ENST00000416584 867 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 TOMM22P1-201ENST00000418578 312 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 H2AFZP6-201ENST00000444403 394 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC091685.2-201ENST00000454924 864 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 RPL35AP28-201ENST00000459730 331 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 RPS17P2-201ENST00000461663 408 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC010469.1-201ENST00000463864 576 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 RPL7P16-201ENST00000479738 738 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 GAPDHP39-201ENST00000481866 979 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC140172.1-201ENST00000502928 141 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC008837.1-201ENST00000511513 412 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 MORF4L1P3-201ENST00000525966 950 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC091515.1-201ENST00000548110 679 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 MTND6P33-201ENST00000571794 183 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 MIR4480-201ENST00000582492 71 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AL669831.4-202ENST00000590817 238 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC110741.2-201ENST00000605278 268 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC092954.1-201ENST00000609121 445 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC048347.1-201ENST00000624621 427 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AC126544.2-201ENST00000625174 749 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 ZNF663P-202ENST00000641770 1131 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 AL133383.2-201ENST00000622958 2336 ntBASIC4.06□□□□□ -1.76
C11orf88Q6PI97 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
C11orf88Q6PI97 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 HMGB1P5-201ENST00000255320 642 ntBASIC4.05□□□□□ -1.76
C11orf88Q6PI97 RNA5SP123-201ENST00000363244 119 ntBASIC4.05□□□□□ -1.76
C11orf88Q6PI97 RNU6-839P-201ENST00000363347 108 ntBASIC4.05□□□□□ -1.76
C11orf88Q6PI97 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 RNU6-629P-201ENST00000384061 103 ntBASIC4.05□□□□□ -1.76
C11orf88Q6PI97 RNU6-761P-201ENST00000384148 107 ntBASIC4.05□□□□□ -1.76
C11orf88Q6PI97 RNU6-339P-201ENST00000384310 107 ntBASIC4.05□□□□□ -1.76
C11orf88Q6PI97 MIR607-201ENST00000385241 96 ntBASIC4.05□□□□□ -1.76
C11orf88Q6PI97 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 HSPE1P26-201ENST00000405341 275 ntBASIC4.05□□□□□ -1.76
C11orf88Q6PI97 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 CRYBB2P1-203ENST00000415709 538 ntBASIC4.05□□□□□ -1.76
C11orf88Q6PI97 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.05□□□□□ -1.76
C11orf88Q6PI97 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.05□□□□□ -1.76
C11orf88Q6PI97 ARF4P4-201ENST00000439608 520 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms