Protein–RNA interactions for Protein: Q02880

TOP2B, DNA topoisomerase 2-beta, humanhuman

Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2BQ02880 AL139395.1-201ENST00000603662 160 ntBASIC5.67□□□□□ -1.5
TOP2BQ02880 RNVU1-4-201ENST00000612985 164 ntBASIC5.67□□□□□ -1.5
TOP2BQ02880 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
TOP2BQ02880 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOP2BQ02880 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOP2BQ02880 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.67□□□□□ -1.5
TOP2BQ02880 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOP2BQ02880 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOP2BQ02880 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TOP2BQ02880 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOP2BQ02880 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.66□□□□□ -1.5
TOP2BQ02880 AL356535.1-201ENST00000440335 398 ntBASIC5.66□□□□□ -1.5
TOP2BQ02880 AC069499.1-201ENST00000489433 509 ntBASIC5.66□□□□□ -1.5
TOP2BQ02880 AC026333.2-201ENST00000542164 106 ntBASIC5.66□□□□□ -1.5
TOP2BQ02880 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.66□□□□□ -1.5
TOP2BQ02880 AC233309.1-201ENST00000619522 751 ntBASIC5.66□□□□□ -1.5
TOP2BQ02880 AL596275.2-204ENST00000641628 552 ntBASIC5.66□□□□□ -1.5
TOP2BQ02880 AL596275.2-206ENST00000641957 626 ntBASIC5.66□□□□□ -1.5
TOP2BQ02880 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TOP2BQ02880 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.66□□□□□ -1.5
TOP2BQ02880 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
TOP2BQ02880 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
TOP2BQ02880 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOP2BQ02880 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOP2BQ02880 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOP2BQ02880 RNA5SP104-201ENST00000410989 118 ntBASIC5.66□□□□□ -1.5
TOP2BQ02880 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TOP2BQ02880 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.66□□□□□ -1.5
TOP2BQ02880 OR5AP1P-201ENST00000529730 940 ntBASIC5.66□□□□□ -1.5
TOP2BQ02880 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.66□□□□□ -1.5
TOP2BQ02880 AC105227.2-201ENST00000615075 605 ntBASIC5.66□□□□□ -1.5
TOP2BQ02880 SNORD39.4-201ENST00000620099 78 ntBASIC5.66□□□□□ -1.5
TOP2BQ02880 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOP2BQ02880 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC5.66□□□□□ -1.5
TOP2BQ02880 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TOP2BQ02880 LINC02471-203ENST00000641941 4752 ntBASIC5.65□□□□□ -1.5
TOP2BQ02880 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.51
TOP2BQ02880 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
TOP2BQ02880 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.65□□□□□ -1.51
TOP2BQ02880 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TOP2BQ02880 HMGN1P24-201ENST00000412282 298 ntBASIC5.65□□□□□ -1.51
TOP2BQ02880 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.65□□□□□ -1.51
TOP2BQ02880 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.65□□□□□ -1.51
TOP2BQ02880 AC233702.9-201ENST00000581528 203 ntBASIC5.65□□□□□ -1.51
TOP2BQ02880 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.65□□□□□ -1.51
TOP2BQ02880 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TOP2BQ02880 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TOP2BQ02880 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TOP2BQ02880 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TOP2BQ02880 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP2BQ02880 MRPS18BP2-201ENST00000434310 759 ntBASIC5.64□□□□□ -1.51
TOP2BQ02880 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP2BQ02880 Y_RNA.638-201ENST00000459374 113 ntBASIC5.64□□□□□ -1.51
TOP2BQ02880 AC021678.1-201ENST00000505195 936 ntBASIC5.64□□□□□ -1.51
TOP2BQ02880 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP2BQ02880 AC023141.12-201ENST00000512399 199 ntBASIC5.64□□□□□ -1.51
TOP2BQ02880 AC018442.3-201ENST00000523025 183 ntBASIC5.64□□□□□ -1.51
TOP2BQ02880 OR4R3P-201ENST00000525084 838 ntBASIC5.64□□□□□ -1.51
TOP2BQ02880 AC004024.1-201ENST00000549244 247 ntBASIC5.64□□□□□ -1.51
TOP2BQ02880 AL157394.1-201ENST00000562983 1224 ntBASIC5.64□□□□□ -1.51
TOP2BQ02880 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.64□□□□□ -1.51
TOP2BQ02880 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.64□□□□□ -1.51
TOP2BQ02880 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TOP2BQ02880 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TOP2BQ02880 HMGN2P8-201ENST00000391458 268 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
TOP2BQ02880 HSPE1P8-201ENST00000406997 288 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.63□□□□□ -1.51
TOP2BQ02880 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 AC006989.1-201ENST00000427212 131 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 RPL23AP69-201ENST00000431134 458 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 RPL32P28-201ENST00000443577 397 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 DNAJC19P8-201ENST00000452887 259 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.63□□□□□ -1.51
TOP2BQ02880 AC011825.1-201ENST00000484967 388 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.63□□□□□ -1.51
TOP2BQ02880 AL451007.1-201ENST00000595491 289 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 AC006557.5-201ENST00000603126 811 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.63□□□□□ -1.51
TOP2BQ02880 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TOP2BQ02880 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.63□□□□□ -1.51
TOP2BQ02880 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TOP2BQ02880 AC068647.1-201ENST00000489539 2265 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 AC011503.2-201ENST00000594230 1500 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TOP2BQ02880 SNORA44-201ENST00000384584 132 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 RNU4-47P-201ENST00000410876 114 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 AC025750.2-201ENST00000442609 450 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 AC004924.1-201ENST00000480160 781 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 RNU6-237P-201ENST00000515985 71 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.63□□□□□ -1.51
TOP2BQ02880 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.63□□□□□ -1.51
TOP2BQ02880 RPL12P50-201ENST00000603116 116 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.63□□□□□ -1.51
TOP2BQ02880 AL158062.1-201ENST00000619632 745 ntBASIC5.63□□□□□ -1.51
TOP2BQ02880 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.63□□□□□ -1.51
TOP2BQ02880 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.62□□□□□ -1.51
TOP2BQ02880 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TOP2BQ02880 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.62□□□□□ -1.51
TOP2BQ02880 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms