Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3AP84243 AC007991.1-201ENST00000522680 631 ntBASIC3.32□□□□□ -1.88
H3F3AP84243 OR7E13P-201ENST00000526052 910 ntBASIC3.32□□□□□ -1.88
H3F3AP84243 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.32□□□□□ -1.88
H3F3AP84243 AP001180.3-201ENST00000582221 145 ntBASIC3.32□□□□□ -1.88
H3F3AP84243 AL163642.2-201ENST00000604722 1019 ntBASIC3.32□□□□□ -1.88
H3F3AP84243 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.32□□□□□ -1.88
H3F3AP84243 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.32□□□□□ -1.88
H3F3AP84243 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.32□□□□□ -1.88
H3F3AP84243 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3AP84243 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3AP84243 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3AP84243 ASNSP1-204ENST00000641977 1664 ntBASIC3.32□□□□□ -1.88
H3F3AP84243 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.32□□□□□ -1.88
H3F3AP84243 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.32□□□□□ -1.88
H3F3AP84243 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.32□□□□□ -1.88
H3F3AP84243 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 AC106871.1-201ENST00000568324 3102 ntBASIC3.31□□□□□ -1.88
H3F3AP84243 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.31□□□□□ -1.88
H3F3AP84243 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.31□□□□□ -1.88
H3F3AP84243 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 Y_RNA.126-201ENST00000363382 111 ntBASIC3.31□□□□□ -1.88
H3F3AP84243 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.31□□□□□ -1.88
H3F3AP84243 HSPE1P8-201ENST00000406997 288 ntBASIC3.31□□□□□ -1.88
H3F3AP84243 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.31□□□□□ -1.88
H3F3AP84243 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.31□□□□□ -1.88
H3F3AP84243 RPL30P2-201ENST00000414021 291 ntBASIC3.31□□□□□ -1.88
H3F3AP84243 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.31□□□□□ -1.88
H3F3AP84243 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 RPL36AP36-201ENST00000418616 301 ntBASIC3.31□□□□□ -1.88
H3F3AP84243 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.31□□□□□ -1.88
H3F3AP84243 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.31□□□□□ -1.88
H3F3AP84243 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.31□□□□□ -1.88
H3F3AP84243 AC023050.1-201ENST00000498198 304 ntBASIC3.31□□□□□ -1.88
H3F3AP84243 UBE2CP3-201ENST00000502715 450 ntBASIC3.31□□□□□ -1.88
H3F3AP84243 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.31□□□□□ -1.88
H3F3AP84243 Vault.1-201ENST00000516474 102 ntBASIC3.31□□□□□ -1.88
H3F3AP84243 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.31□□□□□ -1.88
H3F3AP84243 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.31□□□□□ -1.88
H3F3AP84243 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.31□□□□□ -1.88
H3F3AP84243 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.31□□□□□ -1.88
H3F3AP84243 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.31□□□□□ -1.88
H3F3AP84243 AL121766.1-201ENST00000547436 487 ntBASIC3.31□□□□□ -1.88
H3F3AP84243 AL133457.1-201ENST00000564251 987 ntBASIC3.31□□□□□ -1.88
H3F3AP84243 AC022146.1-201ENST00000595307 847 ntBASIC3.31□□□□□ -1.88
H3F3AP84243 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.31□□□□□ -1.88
H3F3AP84243 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.31□□□□□ -1.88
H3F3AP84243 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.31□□□□□ -1.88
H3F3AP84243 AL589935.2-201ENST00000616471 1231 ntBASIC3.31□□□□□ -1.88
H3F3AP84243 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
H3F3AP84243 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
H3F3AP84243 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3AP84243 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
H3F3AP84243 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
H3F3AP84243 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3AP84243 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3AP84243 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.3□□□□□ -1.88
H3F3AP84243 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3AP84243 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3AP84243 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3AP84243 RPL7P60-201ENST00000397636 735 ntBASIC3.3□□□□□ -1.88
H3F3AP84243 MTHFD2P2-201ENST00000407725 247 ntBASIC3.3□□□□□ -1.88
H3F3AP84243 CYCSP19-201ENST00000411715 316 ntBASIC3.3□□□□□ -1.88
H3F3AP84243 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3AP84243 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.3□□□□□ -1.88
H3F3AP84243 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.3□□□□□ -1.88
H3F3AP84243 AC007537.2-201ENST00000472093 511 ntBASIC3.3□□□□□ -1.88
H3F3AP84243 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.3□□□□□ -1.88
H3F3AP84243 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.3□□□□□ -1.88
H3F3AP84243 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3AP84243 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.3□□□□□ -1.88
H3F3AP84243 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.3□□□□□ -1.88
H3F3AP84243 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3AP84243 AC022884.3-201ENST00000579571 248 ntBASIC3.3□□□□□ -1.88
H3F3AP84243 AC067852.4-201ENST00000590314 478 ntBASIC3.3□□□□□ -1.88
H3F3AP84243 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.3□□□□□ -1.88
H3F3AP84243 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3AP84243 RMST_5.1-201ENST00000618704 126 ntBASIC3.3□□□□□ -1.88
H3F3AP84243 AC020978.9-201ENST00000624380 1141 ntBASIC3.3□□□□□ -1.88
H3F3AP84243 AP000553.6-201ENST00000641242 118 ntBASIC3.3□□□□□ -1.88
H3F3AP84243 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3AP84243 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
H3F3AP84243 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3AP84243 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3AP84243 AL161912.2-201ENST00000565707 3007 ntBASIC3.3□□□□□ -1.88
H3F3AP84243 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
H3F3AP84243 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.29□□□□□ -1.88
H3F3AP84243 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3AP84243 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
H3F3AP84243 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3AP84243 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms