Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MIR6875-201ENST00000617506 72 ntBASIC3.94□□□□□ -1.78
CDH6P55285 AP004607.9-201ENST00000618202 316 ntBASIC3.94□□□□□ -1.78
CDH6P55285 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDH6P55285 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH6P55285 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH6P55285 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH6P55285 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH6P55285 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH6P55285 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH6P55285 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH6P55285 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CDH6P55285 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH6P55285 U1.1-201ENST00000384101 164 ntBASIC3.93□□□□□ -1.78
CDH6P55285 ATP5F1P4-201ENST00000397288 746 ntBASIC3.93□□□□□ -1.78
CDH6P55285 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH6P55285 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH6P55285 HIGD1AP12-201ENST00000427832 281 ntBASIC3.93□□□□□ -1.78
CDH6P55285 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.93□□□□□ -1.78
CDH6P55285 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH6P55285 AC087385.1-201ENST00000475062 312 ntBASIC3.93□□□□□ -1.78
CDH6P55285 VN1R105P-201ENST00000486595 910 ntBASIC3.93□□□□□ -1.78
CDH6P55285 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
CDH6P55285 RN7SL323P-201ENST00000494712 295 ntBASIC3.93□□□□□ -1.78
CDH6P55285 RPL30P11-201ENST00000495304 339 ntBASIC3.93□□□□□ -1.78
CDH6P55285 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH6P55285 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH6P55285 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH6P55285 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH6P55285 AP002812.4-201ENST00000532139 286 ntBASIC3.93□□□□□ -1.78
CDH6P55285 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.93□□□□□ -1.78
CDH6P55285 AC092747.2-201ENST00000545069 983 ntBASIC3.93□□□□□ -1.78
CDH6P55285 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CDH6P55285 CYCSP30-201ENST00000546447 172 ntBASIC3.93□□□□□ -1.78
CDH6P55285 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH6P55285 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH6P55285 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH6P55285 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH6P55285 MTND4LP24-201ENST00000572277 291 ntBASIC3.93□□□□□ -1.78
CDH6P55285 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH6P55285 AC020914.4-201ENST00000597690 277 ntBASIC3.93□□□□□ -1.78
CDH6P55285 MTCO3P22-201ENST00000603219 784 ntBASIC3.93□□□□□ -1.78
CDH6P55285 AC115621.1-201ENST00000604653 858 ntBASIC3.93□□□□□ -1.78
CDH6P55285 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH6P55285 AC110792.4-201ENST00000609843 298 ntBASIC3.93□□□□□ -1.78
CDH6P55285 FP236240.3-201ENST00000623061 327 ntBASIC3.93□□□□□ -1.78
CDH6P55285 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH6P55285 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH6P55285 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH6P55285 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH6P55285 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH6P55285 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH6P55285 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH6P55285 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH6P55285 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH6P55285 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH6P55285 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH6P55285 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH6P55285 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH6P55285 RNU1-18P-201ENST00000363062 164 ntBASIC3.92□□□□□ -1.78
CDH6P55285 AL590290.1-201ENST00000405336 380 ntBASIC3.92□□□□□ -1.78
CDH6P55285 SNORA3.3-201ENST00000408712 125 ntBASIC3.92□□□□□ -1.78
CDH6P55285 RANP4-201ENST00000413361 655 ntBASIC3.92□□□□□ -1.78
CDH6P55285 AL031736.2-201ENST00000426573 787 ntBASIC3.92□□□□□ -1.78
CDH6P55285 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH6P55285 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.92□□□□□ -1.78
CDH6P55285 RN7SL93P-201ENST00000463035 293 ntBASIC3.92□□□□□ -1.78
CDH6P55285 RN7SL132P-201ENST00000478131 296 ntBASIC3.92□□□□□ -1.78
CDH6P55285 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH6P55285 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH6P55285 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH6P55285 USP9YP5-201ENST00000511770 630 ntBASIC3.92□□□□□ -1.78
CDH6P55285 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.92□□□□□ -1.78
CDH6P55285 RNU6-760P-201ENST00000516078 97 ntBASIC3.92□□□□□ -1.78
CDH6P55285 RN7SKP209-201ENST00000516888 304 ntBASIC3.92□□□□□ -1.78
CDH6P55285 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CDH6P55285 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH6P55285 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.92□□□□□ -1.78
CDH6P55285 AGGF1P8-201ENST00000562979 1000 ntBASIC3.92□□□□□ -1.78
CDH6P55285 AL133457.1-201ENST00000564251 987 ntBASIC3.92□□□□□ -1.78
CDH6P55285 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH6P55285 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH6P55285 ZNF92P3-201ENST00000596594 954 ntBASIC3.92□□□□□ -1.78
CDH6P55285 SNORA62.6-201ENST00000606322 83 ntBASIC3.92□□□□□ -1.78
CDH6P55285 AC009032.1-201ENST00000617574 431 ntBASIC3.92□□□□□ -1.78
CDH6P55285 AC068831.8-201ENST00000620171 435 ntBASIC3.92□□□□□ -1.78
CDH6P55285 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.92□□□□□ -1.78
CDH6P55285 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH6P55285 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH6P55285 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH6P55285 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH6P55285 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH6P55285 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.92□□□□□ -1.78
CDH6P55285 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH6P55285 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH6P55285 AC083899.2-201ENST00000423285 1376 ntBASIC3.91□□□□□ -1.78
CDH6P55285 AC106871.1-201ENST00000568324 3102 ntBASIC3.91□□□□□ -1.78
CDH6P55285 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH6P55285 MIR124-3-201ENST00000384866 87 ntBASIC3.91□□□□□ -1.78
CDH6P55285 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH6P55285 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms