Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC104986.1-201ENST00000517978 436 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.52□□□□□ -1.85
GTF2A1P52655 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.52□□□□□ -1.85
GTF2A1P52655 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.52□□□□□ -1.85
GTF2A1P52655 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.52□□□□□ -1.85
GTF2A1P52655 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.52□□□□□ -1.85
GTF2A1P52655 AC067852.4-201ENST00000590314 478 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.52□□□□□ -1.85
GTF2A1P52655 AL137849.1-201ENST00000604767 169 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
GTF2A1P52655 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
GTF2A1P52655 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.52□□□□□ -1.85
GTF2A1P52655 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.52□□□□□ -1.85
GTF2A1P52655 AC103988.1-201ENST00000566382 2177 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GTF2A1P52655 AL353743.1-202ENST00000431724 1695 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
GTF2A1P52655 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GTF2A1P52655 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
GTF2A1P52655 AL136164.4-201ENST00000625013 2135 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
GTF2A1P52655 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GTF2A1P52655 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GTF2A1P52655 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GTF2A1P52655 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
GTF2A1P52655 MIR105-2-201ENST00000385083 81 ntBASIC3.51□□□□□ -1.85
GTF2A1P52655 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.51□□□□□ -1.85
GTF2A1P52655 VN1R31P-201ENST00000417498 730 ntBASIC3.51□□□□□ -1.85
GTF2A1P52655 RPL31P45-201ENST00000419532 356 ntBASIC3.51□□□□□ -1.85
GTF2A1P52655 AC006960.1-201ENST00000419980 153 ntBASIC3.51□□□□□ -1.85
GTF2A1P52655 SAGE2P-201ENST00000420011 2126 ntBASIC3.51□□□□□ -1.85
GTF2A1P52655 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.51□□□□□ -1.85
GTF2A1P52655 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.51□□□□□ -1.85
GTF2A1P52655 AC084198.1-201ENST00000477747 402 ntBASIC3.51□□□□□ -1.85
GTF2A1P52655 AC093267.1-201ENST00000489176 961 ntBASIC3.51□□□□□ -1.85
GTF2A1P52655 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.51□□□□□ -1.85
GTF2A1P52655 AC099522.1-202ENST00000514718 367 ntBASIC3.51□□□□□ -1.85
GTF2A1P52655 RN7SKP92-201ENST00000517266 244 ntBASIC3.51□□□□□ -1.85
GTF2A1P52655 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
GTF2A1P52655 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.51□□□□□ -1.85
GTF2A1P52655 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.51□□□□□ -1.85
GTF2A1P52655 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.51□□□□□ -1.85
GTF2A1P52655 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.51□□□□□ -1.85
GTF2A1P52655 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.51□□□□□ -1.85
GTF2A1P52655 MIR7151-201ENST00000617477 60 ntBASIC3.51□□□□□ -1.85
GTF2A1P52655 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.51□□□□□ -1.85
GTF2A1P52655 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
GTF2A1P52655 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GTF2A1P52655 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
GTF2A1P52655 FAM91A3P-201ENST00000456826 2544 ntBASIC3.51□□□□□ -1.85
GTF2A1P52655 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
GTF2A1P52655 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.51□□□□□ -1.85
GTF2A1P52655 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GTF2A1P52655 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GTF2A1P52655 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GTF2A1P52655 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
GTF2A1P52655 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
GTF2A1P52655 MIR550A3-201ENST00000390735 95 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 AL035419.1-201ENST00000397037 564 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 HMGB3P19-201ENST00000403971 560 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.5□□□□□ -1.85
GTF2A1P52655 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.5□□□□□ -1.85
GTF2A1P52655 AL513174.1-201ENST00000423182 629 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.5□□□□□ -1.85
GTF2A1P52655 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.5□□□□□ -1.85
GTF2A1P52655 FCF1P7-201ENST00000451185 558 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 AL590639.1-201ENST00000456484 337 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.5□□□□□ -1.85
GTF2A1P52655 RPL23AP24-201ENST00000458203 385 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
GTF2A1P52655 RPS20P4-201ENST00000461659 355 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 AK3P4-201ENST00000504283 583 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
GTF2A1P52655 AC093720.1-201ENST00000505681 714 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.5□□□□□ -1.85
GTF2A1P52655 RNU6-347P-201ENST00000516658 105 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.5□□□□□ -1.85
GTF2A1P52655 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.5□□□□□ -1.85
GTF2A1P52655 FAM106CP-201ENST00000582212 507 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 AC020915.5-201ENST00000596836 964 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 YWHAQP7-201ENST00000603536 658 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 Mico1.1-201ENST00000611698 204 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 AC131902.3-201ENST00000611767 581 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 AC110801.1-201ENST00000623590 212 ntBASIC3.5□□□□□ -1.85
GTF2A1P52655 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
GTF2A1P52655 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.49□□□□□ -1.85
GTF2A1P52655 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
GTF2A1P52655 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.49□□□□□ -1.85
GTF2A1P52655 RNA5SP42-201ENST00000364278 115 ntBASIC3.49□□□□□ -1.85
GTF2A1P52655 AL161909.1-201ENST00000397390 712 ntBASIC3.49□□□□□ -1.85
GTF2A1P52655 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
GTF2A1P52655 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.49□□□□□ -1.85
GTF2A1P52655 RN7SKP156-201ENST00000410308 342 ntBASIC3.49□□□□□ -1.85
GTF2A1P52655 RPL31P2-201ENST00000413849 377 ntBASIC3.49□□□□□ -1.85
GTF2A1P52655 OR1AA1P-201ENST00000419597 916 ntBASIC3.49□□□□□ -1.85
GTF2A1P52655 HMGB3P15-201ENST00000507326 574 ntBASIC3.49□□□□□ -1.85
GTF2A1P52655 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.49□□□□□ -1.85
GTF2A1P52655 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.49□□□□□ -1.85
GTF2A1P52655 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.49□□□□□ -1.85
GTF2A1P52655 AC055876.1-202ENST00000567053 138 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms